The compactization of a single DNA molecule in polyethylene glycol (PEG) solution was investigated both theoretically and experimentally. A theory is proposed taking into account the polyelectrolyte effect and redistribution of PEG within DNA coils. This approach makes it possible to describe the dependence of critical value, c, of PEG concentration at the point of DNA collapse on the degree of PEG polymerization, P, and on the concentration of low-molecular salt, ns. Observation of single DNA molecule in solution of PEG has been carried out by means of fluorescence microscopy which allows one to observe the conformation of individual DNA directly. Direct evidence that the coil–globule transition of DNA occurs as first order phase transition was obtained. It was confirmed that the critical concentration of PEG decreases with an increase of the degree of PEG polymerization and salt concentration. The width of the coexistence region of coil and globule was found to be dependent on salt concentration and degree of polymerization of PEG. It was found that DNA undergoes re-entrant globule–coil transition in concentrated solution of high-molecular weight PEG. These experimental results correspond well to the theoretical predictions.
Recently, it has become clear that single, long duplex DNAs
exhibit a large discrete transition between elongated
coil and compacted globule states. To obtain further insight into
this phenomenon, in the present study we
observed individual DNA chains in an aqueous environment by
fluorescence microscopy. The long-axis
lengths of individual T4DNA (166 kbp) were calibrated to obtain a size
distribution. The main purpose of
the present study was to determine the effect of the valence of cations
on the coil−globule transition. We
used the following multivalent cations to induce the compaction of long
DNA chains: 1,3-diaminopropane
(bivalent), spermidine (trivalent), and spermine (tetravalent).
Our results showed that the collapse of isolated
DNA chains induced by either bivalent or multivalent cations is
discrete. The critical concentration of cation
for inducing the transition was lowest for the tetravalent cation and
highest for the bivalent cation. We also
compare the properties of the transition observed experimentally with a
theoretical calculation including the
effects on condensation of multivalent cations and ion-exchange
reaction.
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