Drought is one of the major problems worldwide. The search for new and efficient microorganisms, from unexplored environments, to be used in association with plants to alleviate the negative effects imposed by water stress, is an interesting alternative. Thus, cacti-associated bacteria from the Brazilian semi-arid region were isolated based on their ability to grow in medium with reduced water availability. Strains were tested for the production of exopolysaccharides (EPS), as well as in vitro plant growth promotion traits. A great proportion of the isolates belong to the genus Bacillus. From a total of forty-eight bacteria, 65% were able to grow in medium with reduced water availability (0.919Aw), exopolysaccharide production was observed for 65% of the strains. The production of indole acetic acid (IAA) exceeding 51μgmL(-1) was observed for 4% and the high solubilization of Ca-P was verified for 6% of the isolates. No strain was able to produce hydrogen cyanide (HCN), 71% produced ammonia and 79% showed a halo of carboxymethyl cellulose (CMC) degradation. Zea mays L. growth promotion under water stress (30% of field capacity) was achieved by two strains of Bacillus spp. This is the first report to describe cacti-associated bacteria from Brazilian semi-arid with plant growth-promoting abilities.
The effects of fertilizer regime on bulk soil microbial communities have been well studied, but this is not the case for the rhizosphere microbiome. The aim of this work was to assess the impact of fertilization regime on wheat rhizosphere microbiome assembly and 16S rRNA gene-predicted functions with soil from the long term Broadbalk experiment at Rothamsted Research. Soil from four N fertilization regimes (organic N, zero N, medium inorganic N and high inorganic N) was sown with seeds of Triticum aestivum cv. Cadenza. 16S rRNA gene amplicon sequencing was performed with the Illumina platform on bulk soil and rhizosphere samples of 4-week-old and flowering plants (10 weeks). Phylogenetic and 16S rRNA gene-predicted functional analyses were performed. Fertilization regime affected the structure and composition of wheat rhizosphere bacterial communities. Acidobacteria and Planctomycetes were significantly depleted in treatments receiving inorganic N, whereas the addition of high levels of inorganic N enriched members of the phylum Bacteroidetes, especially after 10 weeks. Bacterial richness and diversity decreased with inorganic nitrogen inputs and was highest after organic treatment (FYM). In general, high levels of inorganic nitrogen fertilizers negatively affect bacterial richness and diversity, leading to a less stable bacterial community structure over time, whereas, more stable bacterial communities are provided by organic amendments. 16S rRNA gene-predicted functional structure was more affected by growth stage than by fertilizer treatment, although, some functions related to energy metabolism and metabolism of terpenoids and polyketides were enriched in samples not receiving any inorganic N, whereas inorganic N addition enriched predicted functions related to metabolism of other amino acids and carbohydrates. Understanding the impact of different fertilizers on the structure and dynamics of the rhizosphere microbiome is an important step toward developing strategies for production of crops in a sustainable way.
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