The classical paradigm about marine N 2 fixation establishes that this process is mainly constrained to nitrogen-poor tropical and subtropical regions, and sustained by the colonial cyanobacterium Trichodesmium spp. and diatom-diazotroph symbiosis. However, the application of molecular techniques allowed determining a high phylogenic diversity and wide distribution of marine diazotrophs, which extends the range of ocean environments where biological N 2 fixation may be relevant. Between February 2014 and December 2015, we carried out 10 one-day samplings in the upwelling system off NW Iberia in order to: (1) investigate the seasonal variability in the magnitude of N 2 fixation, (2) determine its biogeochemical role as a mechanism of new nitrogen supply, and (3) quantify the main diazotrophs in the region under contrasting hydrographic regimes. Our results indicate that the magnitude of N 2 fixation in this region was relatively low (0.001 ± 0.002 -0.095 ± 0.024 µmol N m −3 d −1 ), comparable to the lower-end of rates described for the subtropical NE Atlantic. Maximum rates were observed at the surface during both upwelling and relaxation conditions. The comparison with nitrate diffusive fluxes revealed the minor role of N 2 fixation (<2%) as a mechanism of new nitrogen supply into the euphotic layer. Small diazotrophs (<10 µm) were responsible for all N 2 fixation activity detected in the region. Quantitative PCR targeting the nifH gene revealed the highest abundances of two sublineages of Candidatus Atelocyanobacterium thalassa or UCYN-A (UCYN-A1 and UCYN-A2), mainly at surface waters during upwelling and relaxation conditions, and of Gammaproteobacteria γ-24774A11 at deep waters during downwelling. Maximum abundance for the three groups were up to 6.7 × 10 2 , 1.5 × 10 3 , and 2.4 × 10 4 nifH copies L −1 , respectively. Our findings demonstrate measurable N 2 fixation activity and presence of diazotrophs throughout the year in a nitrogen-rich temperate region.
Knowledge of the ecology of N 2 -fixing (diazotrophic) plankton is mainly limited to oligotrophic (sub)tropical oceans. However, diazotrophs are widely distributed and active throughout the global ocean. Likewise, relatively little is known about the temporal dynamics of diazotrophs in productive areas. Between February 2014 and December 2015, we carried out 9 one-day samplings in the temperate northwestern Iberian upwelling system to investigate the temporal and vertical variability of the diazotrophic community and its relationship with hydrodynamic forcing. In downwelling conditions, characterized by deeper mixed layers and a homogeneous water column, non-cyanobacterial diazotrophs belonging mainly to nifH clusters 1G (Gammaproteobacteria) and 3 (putative anaerobes) dominated the diazotrophic community. In upwelling and relaxation conditions, affected by enhanced vertical stratification and hydrographic variability, the community was more heterogeneous vertically but less diverse, with prevalence of UCYN-A (unicellular cyanobacteria, subcluster 1B) and non-cyanobacterial diazotrophs from clusters 1G and 3. Oligotyping analysis of UCYN-A phylotype showed that UCYN-A2 sublineage was the most abundant (74%), followed by UCYN-A1 (23%) and UCYN-A4 (2%). UCYN-A1 oligotypes exhibited relatively low frequencies during the three hydrographic conditions, whereas UCYN-A2 showed higher abundances during upwelling and relaxation. Our findings show the presence of a diverse and temporally variable diazotrophic community driven by hydrodynamic forcing in an upwelling system.
Abstract. The effect of inorganic nutrients on planktonic assemblages has traditionally relied on concentrations rather than estimates of nutrient supply. We combined a novel dataset of hydrographic properties, turbulent mixing, nutrient concentration, and picoplankton community composition with the aims of (i) quantifying the role of temperature, light, and nitrate fluxes as factors controlling the distribution of autotrophic and heterotrophic picoplankton subgroups, as determined by flow cytometry, and (ii) describing the ecological niches of the various components of the picoplankton community. Data were collected at 97 stations in the Atlantic Ocean, including tropical and subtropical open-ocean waters, the northwestern Mediterranean Sea, and the Galician coastal upwelling system of the northwest Iberian Peninsula. A generalized additive model (GAM) approach was used to predict depth-integrated biomass of each picoplankton subgroup based on three niche predictors: sea surface temperature, averaged daily surface irradiance, and the transport of nitrate into the euphotic zone, through both diffusion and advection. In addition, niche overlap among different picoplankton subgroups was computed using nonparametric kernel density functions. Temperature and nitrate supply were more relevant than light in predicting the biomass of most picoplankton subgroups, except for Prochlorococcus and low-nucleic-acid (LNA) prokaryotes, for which irradiance also played a significant role. Nitrate supply was the only factor that allowed the distinction among the ecological niches of all autotrophic and heterotrophic picoplankton subgroups. Prochlorococcus and LNA prokaryotes were more abundant in warmer waters (>20 ∘C) where the nitrate fluxes were low, whereas Synechococcus and high-nucleic-acid (HNA) prokaryotes prevailed mainly in cooler environments characterized by intermediate or high levels of nitrate supply. Finally, the niche of picoeukaryotes was defined by low temperatures and high nitrate supply. These results support the key role of nitrate supply, as it not only promotes the growth of large phytoplankton, but it also controls the structure of marine picoplankton communities.
Difficulties to quantify ocean turbulence have limited our knowledge about the magnitude and variability of nitrate turbulent diffusion, which constitutes one of the main processes responsible for the supply of nitrogen to phytoplankton inhabiting the euphotic zone. We use an extensive dataset of microturbulence observations collected in contrasting oceanic regions, to build a model for nitrate diffusion into the euphotic zone, and obtain the first global map for the distribution of this process. A model including two predictors (surface temperature and nitrate vertical gradient) explained 50% of the variance in the nitrate diffusive flux. This model was applied to climatological data to predict nitrate diffusion in oligotrophic mid and low latitude regions. Mean nitrate diffusion (~ 20 Tmol N y−1) was comparable to nitrate entrainment due to seasonal mixed-layer deepening between 40°N–40ºS, and to the sum of global estimates of nitrogen fixation, fluvial fluxes and atmospheric deposition. These results indicate that nitrate diffusion represents one of the major sources of new nitrogen into the surface ocean in these regions.
<p><strong>Abstract.</strong> The effect of inorganic nutrients on planktonic assemblages has been traditionally relied on concentrations rather than estimates of nutrient supply. We combined a novel dataset of hydrographic properties, turbulent mixing, nutrient concentration and picoplankton community composition with the aim of: i) quantifying the role of temperature, light and nitrate fluxes as factors controlling the distribution of autotrophic and heterotrophic picoplankton subgroups, as determined by flow cytometry; and ii) describing the ecological niches of the various components of the picoplankton community. Data were collected in 97 stations in the Atlantic Ocean, including tropical and subtropical open ocean waters, the northwestern Mediterranean Sea, and the Galician coastal upwelling system of the Northwest Iberian Peninsula. A Generalized Additive Model (GAM) approach was used to predict depth-integrated biomass of each picoplankton subgroup based on three niche predictors: sea surface temperature, averaged daily surface irradiance, and the transport of nitrate into the euphotic zone, through both diffusion and advection. In addition, niche overlap between different picoplankton subgroups was computed using non-parametric kernel density functions. Temperature and nitrate supply were more relevant than light in predicting the biomass of most picoplankton subgroups, except for <i>Prochlorococcus</i> and low nucleic acid (LNA) prokaryotes, for which irradiance also played a significant role. Nitrate supply was the only factor that allowed the distinction between the ecological niches of all autotrophic and heterotrophic picoplankton subgroups. <i>Prochlorococcus</i> and LNA prokaryotes were more abundant in warmer waters (>&#8201;20&#8201;&#186;C) where the nitrate fluxes were low, whereas <i>Synechococcus</i> and high nucleic acid (HNA) prokaryotes prevailed mainly in cooler environments characterized by intermediate or high levels of nitrate supply. Finally, the niche of picoeukaryotes was defined by lower temperatures and high nitrate supply. We estimated that with the predicted decrease in nitrate supply as the result of global change, a 9&#8201;% increase in the ratio cyanobacteria to picoeukaryotes would occur in a future ocean, something that would have important implications, given the contribution of smallest cells to the biological carbon pump. These results support the key role of nitrate supply, as it not only promotes the growth of large phytoplankton, but it also controls the structure of marine picoplankton communities.</p>
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