Host defence peptides (HDPs) are critical components of innate immunity. Despite their diversity, they share common features including a structural signature, designated "γ-core motif". We reasoned that for each HDPs evolved from an ancestral γ-core, the latter should be the evolutionary starting point of the molecule, i.e. it should represent a structural scaffold for the modular construction of the full-length molecule, and possess biological properties. We explored the γ-core of human β-defensin 3 (HBD3) and found that it: (a) is the folding nucleus of HBD3; (b) folds rapidly and is stable in human serum; (c) displays antibacterial activity; (d) binds to CD98, which mediates HBD3 internalization in eukaryotic cells; (e) exerts antiviral activity against human immunodeficiency virus and herpes simplex virus; and (f) is not toxic to human cells. These results demonstrate that the γ-core within HBD3 is the ancestral core of the full-length molecule and is a viable HDP per se, since it is endowed with the most important biological features of HBD3. Notably, the small, stable scaffold of the HBD3 γ-core can be exploited to design disease-specific antimicrobial agents.Host defence peptides (HDPs) are a critical component of innate immunity, and represent a first line of defence against infection by a broad spectrum of pathogens. HDP expression is found in the host tissues most exposed to microorganisms (skin and internal epithelia of e.g. the respiratory and gastrointestinal tracts) and in the cells of the immune system (macrophages, lymphocytes, platelets etc.)1 . Since a number of pathogens that are refractory to conventional antibiotics are sensitive to HDPs, there is considerable interest in the development of these peptides as therapeutics 2 . Moreover, it is becoming increasingly clear that these multifunctional peptides exert other functions besides antimicrobial action, for example, they are involved in the immune surveillance against cancer 3 . Accordingly, almost 1,000 different HDPs have been identified 4 . Despite this diversity, all HDPs share the following features: a small size (< 10 kDa), a positive charge at neutral pH, and an amphipathic structure. This secondary structure drives the interaction of HDP with lipid bilayers and, critically, it enables selectivity between
The analysis of factors contributing to the stability of proteins is a subject of intense debate. Particularly challenging is the study of structural proteins, since their function is their structure. Among these is collagen, the key structural component of bones, skin, cartilage, tendons, and other connecting tissues. It is well established that the collagen triple helix is characterized by the presence of hydroxyproline, whose content modulates triple helix thermal stability according to the requirement of the host organism. Because of the complexity and the fibrous nature of collagen, data on the stability and structure of this protein have been mainly obtained by the use of collagen-like polypeptides. On the basis of CD characterization of collagen-like polypeptides we here show that the presence of Hyp at the X position of repeating triplets Hyp-Hyp-Gly stabilizes the triple helix significantly. This extra-stabilization has been ascribed, by using molecular modeling, to the formation of a hydrogen bond between Hyp residues belonging to the X and the Y positions of adjacent chains. This communication also provides a comprehensive interpretation of the ensemble of available data on polypeptides containing proline derivatives.
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