Members of the archaeal phylum Bathyarchaeota are widespread and abundant in the energy-deficient marine subsurface sediments. However, their life strategies have remained largely elusive. Here, we provide genetic evidence that some lineages of Bathyarchaeota are acetogens, being capable of homoacetogenesis, a metabolism so far restricted to the domain Bacteria. Metabolic reconstruction based on genomic bins assembled from the metagenome of deep-sea subsurface sediments shows that the metabolism of some lineages of Bathyarchaeota is similar to that of bona fide bacterial homoacetogens, by having pathways for acetogenesis and for the fermentative utilization of a variety of organic substrates. Heterologous expression and activity assay of the acetate kinase gene ack from Bathyarchaeota, demonstrate further the capability of these Bathyarchaeota to grow as acetogens. The presence and expression of bathyarchaeotal genes indicative of active acetogenesis was also confirmed in Peru Margin subsurface sediments where Bathyarchaeota are abundant. The analyses reveal that this ubiquitous and abundant subsurface archaeal group has adopted a versatile life strategy to make a living under energy-limiting conditions. These findings further expand the metabolic potential of Archaea and argue for a revision of the role of Archaea in the carbon cycle of marine sediments.
Field, greenhouse, and growth chamber experiments were conducted to determine the effects of different burial treatments on photosynthesis (carbon dioxide exchange rate), chlorophyll-a fluorescence, leaf area, biomass, leaf thickness, total chlorophyll content and chlorophyll a/b ratio of ten sand dune species: Agropyron psammophilum, Cakile edentula, Cirsium pitcheri, Corispermum hyssopifolium, Elymus canadensis, Oenothera biennis, Panicum virgatum, Strophostyles helvola, Tusilago farfara, and Xanthium strumarium. Although there were significant differences between species, all of them exhibited stimulation in growth following burial in sand. Generally, buried plants of these species showed an increase in biomass, photosynthetic efficiency, and chlorophyll-a fluorescence because of higher energy content in their roots, rhizomes, and underground stems. The main reasons for the stimulation in growth were an increase in leaf area, leaf thickness, and root biomass. The total chlorophyll content of leaves of buried plants of A. psammophilum, E. canadensis, and P. virgatum was higher than controls, but there were no significant differences for Cirsium pitcheri, O. biennis, and S. helvola. The similarities and differences exhibited by the test species in their responses to burial would be ecologically adaptive to survive the harsh environmental conditions of foredunes. All species showed a clear compensatory response following recovery from the burial episode and surpassed control by enhancing the vital physiological, morphological and growth functions.
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