Probably no other field of statistical physics at the borderline of soft matter and biological physics has caused such a flurry of papers as polymer translocation since the 1994 landmark paper by Bezrukov, Vodyanoy, and Parsegian and the study of Kasianowicz in 1996. Experiments, simulations, and theoretical approaches are still contributing novel insights to date, while no universal consensus on the statistical understanding of polymer translocation has been reached. We here collect the published results, in particular, the famous-infamous debate on the scaling exponents governing the translocation process. We put these results into perspective and discuss where the field is going. In particular, we argue that the phenomenon of polymer translocation is non-universal and highly sensitive to the exact specifications of the models and experiments used towards its analysis.
It is generally believed that random search processes based on scalefree, Lévy stable jump length distributions (Lévy flights) optimize the search for sparse targets. Here we show that this popular search advantage is less universal than commonly assumed. We study the efficiency of a minimalist search model based on Lévy flights in the absence and presence of an external drift (underwater current, atmospheric wind, a preference of the walker owing to prior experience, or a general bias in an abstract search space) based on two different optimization criteria with respect to minimal search time and search reliability (cumulative arrival probability). Although Lévy flights turn out to be efficient search processes when the target is far from the starting point, or when relative to the starting point the target is upstream, we show that for close targets and for downstream target positioning regular Brownian motion turns out to be the advantageous search strategy. Contrary to claims that Lévy flights with a critical exponent α = 1 are optimal for the search of sparse targets in different settings, based on our optimization parameters the optimal α may range in the entire interval (1, 2) and especially include Brownian motion as the overall most efficient search strategy.search optimization | stochastic processes | Lévy foraging hypothesis H ow do you find the proverbial needle in the haystack or an enemy submarine in the vast expanse of the sea? Scientists have studied the dynamics and optimization of search processes for decades, their interests ranging from military tasks such as locating enemy vessels or mines in the ocean and search strategies of animals for food to diffusion control of molecular processes in biological cells (1-4). Without prior knowledge about the location of the target, a searcher randomly explores the search space. However, as already argued by Shlesinger and Klafter (5), instead of performing a Brownian walk a better search strategy for sparse targets is that of a Lévy flight (LF): The agent moves randomly with a power-law distribution λðxÞ ' jxj −1−α of relocation lengths. Owing to their scale-free, fractal character, LFs combine local exploration with decorrelating, long-range excursions. These effect a reduced oversampling compared with Brownian search (i.e., the forager is less likely to return to previously visited sites). In the field of movement ecology (6), such random jump-like search processes are often referred to as "blind search" using saltatory motion, which is typical for predators hunting at spatial scales that exceed their sensory range (7-10). Such blind search, inter alia, was observed for fully aquatic marine vertebrate predators including plankton-feeding basking sharks (Cetorhinus maximus) (11), jellyfish predators, leatherback turtles (Dermochelys coriacea) (12), and southern elephant seals (13). This is the kind of search motion we investigate here.How commonly are LFs actually observed in nature? Apart from the flight of the albatross (14, 15), power-law relocation...
We study the viscoelastic response of amorphous polymers using theory and simulations. By accounting for internal stresses and considering instantaneous normal modes (INMs) within athermal non-affine theory, we make parameter-free predictions of the dynamic viscoelastic moduli obtained in coarse-grained simulations of polymer glasses at non-zero temperatures. The theoretical results show very good correspondence with rheology data collected from molecular dynamics simulations over five orders of magnitude in frequency, with some instabilities that accumulate in the low-frequency part on approach to the glass transition. These results provide evidence that the mechanical glass transition itself is continuous and thus represents a crossover rather than a true phase transition. The relatively sharp drop of the low-frequency storage modulus across the glass transition temperature can be explained mechanistically within the proposed theory: the proliferation of low-eigenfrequency vibrational excitations (boson peak and nearly-zero energy excitations) is directly responsible for the rapid growth of a negative non-affine contribution to the storage modulus.
We study the efficiency of random search processes based on Lévy flights with power-law distributed jump lengths in the presence of an external drift, for instance, an underwater current, an airflow, or simply the bias of the searcher based on prior experience. While Lévy flights turn out to be efficient search processes when relative to the starting point the target is upstream, in the downstream scenario regular Brownian motion turns out to be advantageous. This is caused by the occurrence of leapovers of Lévy flights, due to which Lévy flights typically overshoot a point or small interval. Extending our recent work on biased LF search [V. V. Palyulin, A. V. Chechkin, and R. Metzler, Proc. Natl. Acad. Sci. USA, 111, 2931 (2014).] we establish criteria when the combination of the external stream and the initial distance between the starting point and the target favors Lévy flights over regular Brownian search. Contrary to the common belief that Lévy flights with a Lévy index α = 1 (i.e., Cauchy flights) are optimal for sparse targets, we find that the optimal value for α may range in the entire interval (1, 2) and include Brownian motion as the overall most efficient search strategy.
scite is a Brooklyn-based organization that helps researchers better discover and understand research articles through Smart Citations–citations that display the context of the citation and describe whether the article provides supporting or contrasting evidence. scite is used by students and researchers from around the world and is funded in part by the National Science Foundation and the National Institute on Drug Abuse of the National Institutes of Health.
customersupport@researchsolutions.com
10624 S. Eastern Ave., Ste. A-614
Henderson, NV 89052, USA
This site is protected by reCAPTCHA and the Google Privacy Policy and Terms of Service apply.
Copyright © 2024 scite LLC. All rights reserved.
Made with 💙 for researchers
Part of the Research Solutions Family.