The NIST Chemistry WebBook (http://webbook.nist.gov) is an Internet site that provides access to chemical and physical property data both from NIST and other sources. The site was established in 1996 and has grown to encompass a wide variety of thermochemical, ion energetics, solubility, and spectroscopic data. The thermochemical data available include enthalpies of formation, enthalpies of phase transitions, and heat capacities. Thermochemical properties of many reactions that support enthalpy of formation values are provided. Automated tools are used to check data prior to its inclusion in the web site. Most of the collections in the site provide extensive coverage of the literature in their field and include relevant metadata such as the experiment type or important auxiliary data. These features make the site an excellent tool for data evaluation. A major goal of the project was to provide convenient access to all types of chemical data. Several challenges were encountered in the development of systems and conventions for concisely and accurately displaying chemical data on the Internet. The next phase of the evolution of the site will be the addition of tools to aid researchers in getting data from the site. Data from the site have found applications in industrial, research, and educational settings. Usage patterns for the site will be discussed.
Recent progress in metabolomics and the development of increasingly sensitive analytical techniques have renewed interest in global profiling, i.e., semiquantitative monitoring of all chemical constituents of biological fluids. In this work, we have performed global profiling of NIST SRM 1950, "Metabolites in Human Plasma", using GC-MS, LC-MS, and NMR. Metabolome coverage, difficulties, and reproducibility of the experiments on each platform are discussed. A total of 353 metabolites have been identified in this material. GC-MS provides 65 unique identifications, and most of the identifications from NMR overlap with the LC-MS identifications, except for some small sugars that are not directly found by LC-MS. Also, repeatability and intermediate precision analyses show that the SRM 1950 profiling is reproducible enough to consider this material as a good choice to distinguish between analytical and biological variability. Clinical laboratory data shows that most results are within the reference ranges for each assay. In-house computational tools have been developed or modified for MS data processing and interactive web display. All data and programs are freely available online at http://peptide.nist.gov/ and http://srmd.nist.gov/ .
The National Institute of Standards and Technology (NIST) Automated Mass Spectral Deconvolution and Identification System (AMDIS) is applied to a selection of data files obtained from the gas chromatography/mass spectrometry (GC/MS) analysis of urinary organic acids. Mass spectra obtained after deconvolution are compared with a special user library containing both the mass spectra and retention indices of ethoxime-trimethylsilyl (EO-TMS) derivatives of a set of organic acids. Efficient identification of components is achieved and the potential of the procedure for automated diagnosis of inborn errors of metabolism and for related research is demonstrated.
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