Experimental and computational methods have been used to examine
the behavior of one-, two-, and
three-bond 13C−1H spin-coupling constants
(1
J
CH,
2
J
CH and
3
J
CH, respectively) within the
β-d-ribofuranosyl ring 1
that may be potentially affected by ring conformation. Ab
initio molecular orbital (MO) calculations at the
HF/6-31G* and MP2/6-31G* levels of theory were employed to assess the effect
of ring conformation on molecular
parameters (i.e., bond lengths, angles, and torsions) of
β-d-ribofuranose (2) and methyl
β-d-ribofuranoside (3), and
these data were validated through comparison to corresponding
parameters obtained by X-ray crystallography. The
MO-derived structural data were subsequently used to compute
1
J
CH,
2
J
CH and
3
J
CH values in 2 as
a function of ring
conformation. This predicted behavior was then tested
experimentally through the measurement of J
CH
values in
conformationally-rigid model compounds (aldopyranosides) containing
13C−1H coupling pathways similar to
those
found in specific conformers of 2 and was examined for
consistency with previously-derived empirical rules
correlating
J
CH with structure in carbohydrates.
Available J
CH data obtained on several
biologically-important compounds
containing β-d-ribofuranosyl rings have been interpreted
in light of the new correlations with ring conformation.
2‘-Deoxyribonucleosides (2‘-deoxyadenosine (1),
2‘-deoxycytidine (2), thymidine (3)) singly
enriched with
13C at C2‘ have been prepared and used to obtain one-,
two-, and three-bond 13C−1H and
13C−13C spin-coupling
constants involving C2‘. Coupling data are interpreted with
assistance from complementary 3
J
HH
data (PSEUROT
analysis), furanose structural parameters obtained from molecular
orbital calculations, structure-coupling correlations
found for J
CH and J
CC in
carbohydrates, and calculated J values. Spin couplings
in 1−3 involving C1‘ and C2‘ are
also compared to corresponding values in ribonucleosides in order to
assess the effects of nucleoside structure and
conformation on J values within the furanose ring.
1
J
C2
‘
,H2
‘
R
and
1
J
C2
‘
,H2
‘
S
in 1−3 and
1
J
C2
‘
,H2
‘
in ribonucleosides
depend on C−H bond orientation;
1
J
C1
‘
,H1
‘
in 1−3 and in ribonucleosides exhibits a
similar dependence. The latter
couplings appear to be essentially unaffected by N-glycoside
torsion. 1
J
CC values depend on
the number and distribution
of electronegative substituents on the C−C fragment. A modified
projection curve is proposed to aid in the
interpretation of
2
J
C2
‘
,H1
‘
values; the presence of N substitution at C1‘ causes a shift
to more negative couplings
relative to the O-substituted analog. In contrast,
2
J
C1
‘
,H2
‘
is essentially unaffected by the same change in the
electronegative substituent at C1‘.
2
J
CC values within the furanose
ring are determined by two coupling pathways;
in one case (i.e.,
2
J
C1
‘
,C3
‘),
the observed coupling is shown to be the algebraic sum of the two
couplings arising from
each pathway. 3
J
CH and
3
J
CC values depend in general on
appropriate molecular dihedral angles as expected (Karplus
relationships); however,
3
J
C2
‘
,H4
‘
values exhibit unexpected behavior, thus suggesting potential
limitations in its use
as a structural probe.
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