Colloidal crystals made of sub-micrometer monodisperse silica or polymer spheres packed in ordered arrays represent a new class of advanced materials that are useful in many areas. For example, they have been used as scaffolds for fabricating highly ordered macroporous materials [1] and as precursors for creating high-strength ceramics.[2] Because of their novel light diffraction and photonic bandgap properties, colloidal crystals are also promising elements in the fabrication of devices such as optical filters and switches, [3] chemical and biochemical sensors, [4] and photonic chips. [5] Various self-assembly techniques based on exploiting gravity sedimentation, [6] electrostatic interaction, [7] and capillary force [8] have been developed to form colloidal crystals on a solid substrate. Although some of these techniques, such as the flow-cell method [9] and vertical deposition, [10] are capable of producing large, single-crystalline domains, for the above-mentioned device applications it is usually necessary to fabricate colloidal crystal films onto substrates with specific microstructures. For this purpose, a large number of templating methods have been combined with the self-assembly of colloidal spheres. For example, Nagayama, Velev, and Yang and their co-workers have demonstrated the use of emulsion droplets as a confined geometry to fabricate free-standing, ordered colloidal sphere aggregates with various shapes, such as spheres, ellipsoids, toroids, and hollow spheres.[11] Wiltzius, Yodh, Whitesides, Ozin, and Xia and their co-workers have used the relief microstructures patterned in substrates as templates to grow colloidal crystals with controllable crystalline orientations, shapes, and sizes.[12] Electrostatic interactions, [13] external electric fields, [14] and wettability [15] have been used to direct the deposition of colloidal spheres over specific regions of planar substrates whose surfaces are pre-patterned into areas differing in charged nature, current density, or wettability. These approaches are usually limited to the formation of concrete assemblies of spheres on substrates, however, generating ordered microstructures between the colloidal crystal film and the substrate, which is important in the fabrication of optical cavities and waveguides for light in a photonic chip,has not yet been well developed. In this paper, we report a method that uses organic liquid patterns as templates to fabricate ordered voids in the colloidal crystal film±substrate system. The original templates, lateral patterns of varying wettability on a substrate, were used to direct the self-organization of an organic liquid [16] under an aqueous colloidal solution of polymer spheres, rather than the self-assembly of colloidal spheres.[15] The self-organized organic liquid patterns on the substrate were stable enough to serve as templates during the deposition process of colloidal spheres and could be removed by spontaneous evaporation after the crystallization was finished, yielding the corresponding ordered ...