Introduction Breast cancer, one of the most common health threats to females worldwide, has always been a crucial topic in the medical field. With the rapid development of digital pathology, many scholars have used AI-based systems to classify breast cancer pathological images. However, most existing studies only stayed on the binary classification of breast lesions (normal vs tumor or benign vs malignant), far from meeting the clinical demand. Therefore, we established a multi-class classification system of breast digital pathology images based on AI, which is more clinically practical than the binary classification system. Methods In this paper, we adopted a two-stage architecture based on deep learning method and machine learning method for the multi-class classification (normal tissue, benign lesion, ductal carcinoma in situ, and invasive carcinoma) of breast digital pathological images. Results The proposed approach achieved an overall accuracy of 86.67% at patch-level. At WSI-level, the overall accuracies of our classification system were 88.16% on validation data and 90.43% on test data. Additionally, we used two public datasets, the BreakHis and BACH, for independent verification. The accuracies our model obtained on these two datasets were comparable to related publications. Furthermore, our model could achieve accuracies of 85.19% on multi-classification and 96.30% on binary classification (non-malignant vs malignant) using pathology images of frozen sections, which was proven to have good generalizability. Then, we used t-SNE for visualization of patch classification efficiency. Finally, we analyzed morphological characteristics of patches learned by the model. Conclusion The proposed two-stage model could be effectively applied to the multi-class classification task of breast pathology images and could be a very useful tool for assisting pathologists in diagnosing breast cancer.
Pancreatic ductal adenocarcinoma (PDAC) is one of the deadliest cancer types worldwide, with the lowest 5-year survival rate among all kinds of cancers. Histopathology image analysis is considered a gold standard for PDAC detection and diagnosis. However, the manual diagnosis used in current clinical practice is a tedious and time-consuming task and diagnosis concordance can be low. With the development of digital imaging and machine learning, several scholars have proposed PDAC analysis approaches based on feature extraction methods that rely on field knowledge. However, feature-based classification methods are applicable only to a specific problem and lack versatility, so that the deep-learning method is becoming a vital alternative to feature extraction. This paper proposes the first deep convolutional neural network architecture for classifying and segmenting pancreatic histopathological images on a relatively large WSI dataset. Our automatic patch-level approach achieved 95.3% classification accuracy and the WSI-level approach achieved 100%. Additionally, we visualized the classification and segmentation outcomes of histopathological images to determine which areas of an image are more important for PDAC identification. Experimental results demonstrate that our proposed model can effectively diagnose PDAC using histopathological images, which illustrates the potential of this practical application.
Establishing quantitative structure-property relationships for the rational design of small molecule drugs at the early discovery stage is highly desirable. Using natural language processing (NLP), we proposed a machine learning...
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