Particulate matter (PM) air pollution poses a formidable public health threat to the city of Beijing. Among the various hazards of PM pollutants, microorganisms in PM2.5 and PM10 are thought to be responsible for various allergies and for the spread of respiratory diseases. While the physical and chemical properties of PM pollutants have been extensively studied, much less is known about the inhalable microorganisms. Most existing data on airborne microbial communities using 16S or 18S rRNA gene sequencing to categorize bacteria or fungi into the family or genus levels do not provide information on their allergenic and pathogenic potentials. Here we employed metagenomic methods to analyze the microbial composition of Beijing’s PM pollutants during a severe January smog event. We show that with sufficient sequencing depth, airborne microbes including bacteria, archaea, fungi, and dsDNA viruses can be identified at the species level. Our results suggested that the majority of the inhalable microorganisms were soil-associated and nonpathogenic to human. Nevertheless, the sequences of several respiratory microbial allergens and pathogens were identified and their relative abundance appeared to have increased with increased concentrations of PM pollution. Our findings may serve as an important reference for environmental scientists, health workers, and city planners.

Easily separable humic acid coated magnetite (HA-Fe3O4) nanoparticles are employed for effective adsorption and reduction of toxic Cr(VI) to nontoxic Cr(III). The adsorption and reduction of Cr(VI) is effective under acidic, neutral, and basic pH conditions. The chromium adsorption nicely fits the Langmuir isotherm model, and the removal of Cr(VI) from aqueous media by HA-Fe3O4 particles follows pseudo-second-order kinetics. Characterization of the Cr-loaded HA-Fe3O4 materials by X-ray absorption near edge structure spectroscopy (XANES) indicates Cr(VI) was reduced to Cr(III) while the valence state of the iron core is unchanged. Fe K-edge extended X-ray absorption fine structure spectroscopy (EXAFS) and X-ray diffraction measurements also indicate no detectable transformation of the Fe3O4 core occurs during Cr(VI) adsorption and reduction. Thus, suggesting HA on the surface of HA-Fe3O4 is responsible for the reduction of Cr(VI) to Cr(III). The functional groups associated with HA act as ligands leading to the Cr(III) complex via a coupled reduction-complexation mechanism. Cr K-edge EXAFS demonstrates the Cr(III) in the Cr-loaded HA-Fe3O4 materials has six neighboring oxygen atoms likely in an octahedral geometry with average bond lengths of 1.98 Å. These results demonstrate that easily separable HA-Fe3O4 particles have promising potential for removal and detoxification of Cr(VI) in aqueous media.

The cloning of long DNA segments, especially those containing large gene clusters, is of particular importance to synthetic and chemical biology efforts for engineering organisms. While cloning has been a defining tool in molecular biology, the cloning of long genome segments has been challenging. Here we describe a technique that allows the targeted cloning of near-arbitrary, long bacterial genomic sequences of up to 100 kb to be accomplished in a single step. The target genome segment is excised from bacterial chromosomes in vitro by the RNA-guided Cas9 nuclease at two designated loci, and ligated to the cloning vector by Gibson assembly. This technique can be an effective molecular tool for the targeted cloning of large gene clusters that are often expensive to synthesize by gene synthesis or difficult to obtain directly by traditional PCR and restriction-enzyme-based methods.

No abstract