Photosynthetic membranes comprise a network of light harvesting and reaction center pigment-protein complexes responsible for the primary photoconversion reactions: light absorption, energy transfer and electron cycling. The structural organization of membranes of the purple bacterial species Rb. sphaeroides has been elucidated in most detail by means of polarized light spectroscopy and atomic force microscopy. Here we report a functional characterization of native and untreated membranes of the same species adsorbed onto a gold surface. Employing fluorescence confocal spectroscopy and light-induced electrochemistry we show that adsorbed membranes maintain their energy and electron transferring functionality. Gold-adsorbed membranes are shown to generate a steady high photocurrent of 10 microA/cm(2) for several minutes and to maintain activity for up to three days while continuously illuminated. The surface-adsorbed membranes exhibit a remarkable functionality under aerobic conditions, even when exposed to light intensities well above that of direct solar irradiation. The component at the interface of light harvesting and electron cycling, the LH1 complex, displays exceptional stability, likely contributing to the robustness of the membranes. Peripheral light harvesting LH2 complexes show a light intensity dependent decoupling from photoconversion. LH2 can act as a reversible switch at low-light, an increased emitter at medium light and photobleaches at high light.
BINoculars is a tool for data reduction and analysis of large sets of surface diffraction data that have been acquired with a two-dimensional X-ray detector. The intensity of each pixel of a two-dimensional detector is projected onto a three-dimensional grid in reciprocal-lattice coordinates using a binning algorithm. This allows for fast acquisition and processing of high-resolution data sets and results in a significant reduction of the size of the data set. The subsequent analysis then proceeds in reciprocal space. It has evolved from the specific needs of the ID03 beamline at the ESRF, but it has a modular design and can be easily adjusted and extended to work with data from other beamlines or from other measurement techniques. This paper covers the design and the underlying methods employed in this software package and explains how BINoculars can be used to improve the workflow of surface X-ray diffraction measurements and analysis.
This article proposes two integration methods to determine the structure factors along a surface diffraction rod measured with a two‐dimensional detector. The first method applies the classic way of calculating integrated intensities in angular space. This is adapted to work efficiently with two‐dimensional data. The second method is based on integration in reciprocal space. An intensity map is created by converting the detected intensity pixel by pixel to the reciprocal space. The integration is then performed directly on this map. A theoretical framework, as well as a comparison between the two integration methods, is provided.
Using
a home-built reflectometer, we have investigated the changes
in the optical reflectivity of a Pd(100) model catalyst during CO
oxidation under high-pressure, high-temperature conditions. We observe
changes in optical contrast when exposing the surface to CO oxidation
conditions at 200 mbar from room temperature up to 400 °C. These
changes in reflectivity are a result both of the formation of a surface
oxide layer and of a change in surface roughness because of gas exposure.
However, the reflectivity is more sensitive to the presence of a thin,
flat oxide layer than to surface roughness. CO oxidation plays an
important role in the decrease of the reflectivity. Since adding a
reducing agent to the gas mixture renders it unlikely that the oxide
thickness increases, we conclude that the observed decrease in reflectivity
is dominated by increased surface roughness because of the catalytic
reaction. We contribute this observed surface roughening to a Mars–van
Krevelen-type reaction mechanism.
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