Cofactors of LIM domain proteins, CLIM1 and CLIM2, are widely expressed transcriptional cofactors that are recruited to gene regulatory regions by DNA-binding proteins, including LIM domain transcription factors. In the cornea, epitheliumspecific expression of a dominant negative (DN) CLIM under the keratin 14 (K14) promoter causes blistering, wounding, inflammation, epithelial hyperplasia, and neovascularization followed by epithelial thinning and subsequent epidermallike differentiation of the corneal epithelium. The defects in corneal epithelial differentiation and cell fate determination suggest that CLIM may regulate corneal progenitor cells and the transition to differentiation. Consistent with this notion, the K14-DN-Clim corneal epithelium first exhibits increased proliferation followed by fewer progenitor cells with decreased proliferative potential. In vivo ChIP-sequencing experiments with corneal epithelium show that CLIM binds to and regulates numerous genes involved in cell adhesion and proliferation, including limbally enriched genes. Intriguingly, CLIM associates primarily with non-LIM homeodomain motifs in corneal epithelial cells, including that of estrogen receptor ␣. Among CLIM targets is the noncoding RNA H19 whose deregulation is associated with Silver-Russell and Beckwith-Wiedemann syndromes. We demonstrate here that H19 negatively regulates corneal epithelial proliferation. In addition to cell cycle regulators, H19 affects the expression of multiple cell adhesion genes. CLIM interacts with estrogen receptor ␣ at the H19 locus, potentially explaining the higher expression of H19 in female than male corneas. Together, our results demonstrate an important role for CLIM in regulating the proliferative potential of corneal epithelial progenitors and identify CLIM downstream target H19 as a regulator of corneal epithelial proliferation and adhesion.
Accurate photometric redshift (photo-z) estimates are essential to the cosmological science goals of the Vera C. Rubin Observatory Legacy Survey of Space and Time (LSST). In this work, we use simulated photometry for mock galaxy catalogs to explore how LSST photo-z estimates can be improved by the addition of near-infrared (NIR) and/or ultraviolet (UV) photometry from the Euclid, Wide-Field InfrarRed Survey Telescope (WFIRST), and/or Cosmological Advanced Survey Telescope for Optical and ultraviolet Research (CASTOR) space telescopes. Generally, we find that deeper optical photometry can reduce the standard deviation of the photo-z estimates more than adding NIR or UV filters but that additional filters are the only way to significantly lower the fraction of galaxies with catastrophically under- or overestimated photo-z. For Euclid, we find that the addition of JH 5σ photometric detections can reduce the standard deviation for galaxies with z > 1 (z > 0.3) by ∼20% (∼10%), and the fraction of outliers by ∼40% (∼25%). For WFIRST, we show how the addition of deep YJHK photometry could reduce the standard deviation by ≳50% at z > 1.5 and drastically reduce the fraction of outliers to just ∼2% overall. For CASTOR, we find that the addition of its UV- and u-band photometry could reduce the standard deviation by ∼30% and the fraction of outliers by ∼50% for galaxies with z < 0.5. We also evaluate the photo-z results within sky areas that overlap with both the NIR and UV surveys and when spectroscopic training sets built from the surveys’ small-area deep fields are used.
Abstract. The IceCube Neutrino Observatory instruments about 1 km3 of deep, glacial ice at the geographic South Pole using 5160 photomultipliers to detect Cherenkov light emitted by charged relativistic particles. A unexpected light propagation effect observed by the experiment is an anisotropic attenuation, which is aligned with the local flow direction of the ice. Birefringent light propagation has been examined as a possible explanation for this effect. The predictions of a first-principles birefringence model developed for this purpose, in particular curved light trajectories resulting from asymmetric diffusion, provide a qualitatively good match to the main features of the data. This in turn allows us to deduce ice crystal properties. Since the wavelength of the detected light is short compared to the crystal size, these crystal properties do not only include the crystal orientation fabric, but also the average crystal size and shape, as a function of depth. By adding small empirical corrections to this first-principles model, a quantitatively accurate description of the optical properties of the IceCube glacial ice is obtained. In this paper, we present the experimental signature of ice optical anisotropy observed in IceCube LED calibration data, the theory and parametrization of the birefringence effect, the fitting procedures of these parameterizations to experimental data as well as the inferred crystal properties.
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