Spectral comparison is an important part of the assignment of the absolute configuration (AC) by vibrational circular dichroism (VCD), or equally by Raman Optical Activity (ROA). In order to avoid bias caused by personal interpretation, numerical methods have been developed to compare measured and calculated spectra. Using a neighbourhood similarity measure, the agreement between a computed and measured VCD or ROA spectrum is expressed numerically to introduce a novel confidence level measure. This allows users of Vibrational Optical Activity (VOA) techniques (VCD and ROA) to assess the reliability of their assignment of the AC of a compound. To that end, a database of successful AC determinations is compiled along with neighbourhood similarity values between the experimental spectrum and computed spectra for both enantiomers. For any new AC determination, the neighbourhood similarities between the experimental spectrum and the computed spectra for both enantiomers are projected on the database allowing an interpretation of the reliability of their assignment.
Mixtures of haloforms of the type HCClnF3-n (n = 0-3) with oxirane-d4 and acetone-d6 have been studied in liquid krypton, using infrared spectroscopy. Analysis of the spectra shows that a small fraction of the monomers is transformed into 1:1 complexes in which the haloform C-H bond is hydrogen bonded to the oxygen atom of the base. For all complexes, the haloform CH stretch is blue shifted, with the shift increasing from chloroform to fluoroform, while the ratio of the infrared intensities of the C-H stretching bands of complexed and free C-H bonds changes from a value well over 50 for the chloroform to a value near 0.1 for the fluoroform complexes. These observations have been corroborated by ab initio calculations using CP-corrected gradient techniques.
Complexes of haloforms of the type HCCl(n)F(3-)(n) (n = 1-3) with dimethyl ether have been studied in liquid argon and liquid krypton, using infrared spectroscopy. For the haloform C[bond]H stretching mode, the complexation causes blue shifts of 10.6 and 4.8 cm(-1) for HCClF(2) and HCCl(2)F, respectively, while for HCCl(3) a red shift of 8.3 cm(-1) is observed. The ratio of the band areas of the haloform C[bond]H stretching in complex and monomer was determined to be 0.86(4) for HCClF(2), 33(3) for HCCl(2)F, and 56(3) for HCCl(3). These observations, combined with those for the HCF(3) complex with the same ether (J. Am. Chem. Soc. 2001, 123, 12290), have been analyzed using ab initio calculations at the MP2[double bond]FC/6-31G(d) level, and using some recent models for improper hydrogen bonding. Ab initio calculations on the haloforms embedded in a homogeneous electric field to model the influence of the ether suggest that the complexation shift of the haloform C[bond]H stretching is largely explained by the electric field effect induced by the electron donor in the proton donor. The model calculations also show that the electric field effect accounts for the observed intensity changes of the haloform C[bond]H stretches.
Although a lot of work has been performed on the vibrational analysis of N-methylacetamide (NMA), some uncertainties and even contradictions remain, mainly due to the fact that the structure of NMA at room temperature is not stable due to traces of water or due to the fact that the authors only studied the infrared or the Raman spectra. On the basis of the infrared and Raman spectra in the -196 °C to +100 °C temperature range, we have shown that the effects of temperature on the structure and the changes in the strength of the hydrogen bonding within a structure elucidate a lot of the complexity of the solid state vibrational spectra of NMA. Force field calculations on the monomer and multimers (n ) 6) and solution spectra of NMA and the N-deuterated compound are used to provide a better understanding of the influence of hydrogen bonding on the typical amide fundamentals. Nine typical so-called "amide bands" have been further characterized.
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