21Accurate estimation of terrestrial gross primary productivity (GPP) remains a challenge despite its 22 importance in the global carbon cycle. Chlorophyll fluorescence (ChlF)
Cobalamin (vitamin B12) is an essential enzyme cofactor for most branches of life. Despite the potential importance of this cofactor for soil microbial communities, the producers and consumers of cobalamin in terrestrial environments are still unknown. Here we provide the first metagenome-based assessment of soil cobalamin-producing bacteria and archaea, quantifying and classifying genes encoding proteins for cobalamin biosynthesis, transport, remodeling, and dependency in 155 soil metagenomes with profile hidden Markov models. We also measured several forms of cobalamin (CN-, Me-, OH-, Ado-B12) and the cobalamin lower ligand (5,6-dimethylbenzimidazole; DMB) in 40 diverse soil samples. Metagenomic analysis revealed that less than 10% of soil bacteria and archaea encode the genetic potential for de novo synthesis of this important enzyme cofactor. Predominant soil cobalamin producers were associated with the Proteobacteria, Actinobacteria, Firmicutes, Nitrospirae, and Thaumarchaeota. In contrast, a much larger proportion of abundant soil genera lacked cobalamin synthesis genes and instead were associated with gene sequences encoding cobalamin transport and cobalamin-dependent enzymes. The enrichment of DMB and corresponding DMB synthesis genes, relative to corrin ring synthesis genes, suggests an important role for cobalamin remodelers in terrestrial habitats. Together, our results indicate that microbial cobalamin production and repair serve as keystone functions that are significantly correlated with microbial community size, diversity, and biogeochemistry of terrestrial ecosystems.
Coastal wetlands are large reservoirs of soil carbon (C). However, the annual C accumulation rates contributing to the C storage in these systems have yet to be spatially estimated on a large scale. We synthesized C accumulation rate (CAR) in tidal wetlands of the conterminous United States (US), upscaled the CAR to national scale, and predicted trends based on climate change scenarios. Here, we show that the mean CAR is 161.8 ± 6 g Cm−2 yr−1, and the conterminous US tidal wetlands sequestrate 4.2–5.0 Tg C yr−1. Relative sea level rise (RSLR) largely regulates the CAR. The tidal wetland CAR is projected to increase in this century and continue their C sequestration capacity in all climate change scenarios, suggesting a strong resilience to sea level rise. These results serve as a baseline assessment of C accumulation in tidal wetlands of US, and indicate a significant C sink throughout this century.
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