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Soil salt content (SSC) is normally featured with obvious spatiotemporal variations in arid and semi-arid regions. Space factors such as elevation, temperature, and spatial locations are usually used as input variables for a model to estimate the SSC. However, whether temporal patterns of salt-affected soils (identified as temporal spectral patterns) can indicate the SSC level and be applied as a covariate in a model to estimate the SSC remains unclear. Hence, temporal changes in soil spectral patterns need to be characterized and explored as to their use as an input variable to improve SSC estimates. In this study, a total of 54 field samples and a time-series of Sentinel-2 multispectral images taken at monthly intervals (from October 2017 to April 2018) were collected in the Yinbei area of western China. Then, two-date satellite images were used to quantify significant spectral changes over time using spectral change vector analysis, and four two-date-based index methods were used to characterize soil spectral changes. Lastly, the optimal two-date-based spectral indices and multispectral bands were used as input variables to build the estimation models using a random forest algorithm. Results showed that the two-date-based spectral index could be applied as an input variable to improve the accuracy of SSC estimation at a regional scale. Temporal changes in salt-induced spectral patterns can be indicated by the band difference in the wavelength range from 400 nm to 900 nm. Three two-date-based indices designated as D28a (i.e., the band difference between band 2 from an image acquired in April 2018 and band 8a from an image acquired in December 2017), D22, and D28 were the optimal parameters for characterizing salt-induced spectral changes, which were dominated by the total brightness, chloride, and sulfate accumulation of the soils. The model did not yield satisfactory estimation results (RPD = 1.49) when multispectral bands were used as the input variables. Multispectral bands coupled with two two-date-based indices (D22 and D28a) used as the input variables produced the best estimation result (R2 = 0.92, RPD = 3.27). Incorporating multispectral bands and two-date-based indices into the random forest model provides a remotely-sensed strategy that effectively supports the monitoring of soil salt content.