In many surveys, the data comprise a large number of categorical variables that suffer from item nonresponse. Standard methods for multiple imputation, like log-linear models or sequential regression imputation, can fail to capture complex dependencies and can be difficult to implement effectively in high dimensions. We present a fully Bayesian, joint modeling approach to multiple imputation for categorical data based on Dirichlet process mixtures of multinomial distributions. The approach automatically models complex dependencies while being computationally expedient. The Dirichlet process prior distributions enable analysts to avoid fixing the number of mixture components at an arbitrary number. We illustrate repeated sampling properties of the approach using simulated data. We apply the methodology to impute missing background data in the 2007 Trends in International Mathematics and Science Study.
It has historically been a challenge to perform Bayesian inference in a design-based survey context. The present paper develops a Bayesian model for sampling inference in the presence of inverse-probability weights. We use a hierarchical approach in which we model the distribution of the weights of the nonsampled units in the population and simultaneously include them as predictors in a nonparametric Gaussian process regression. We use simulation studies to evaluate the performance of our procedure and compare it to the classical design-based estimator. We apply our method to the Fragile Family and Child Wellbeing Study. Our studies find the Bayesian nonparametric finite population estimator to be more robust than the classical design-based estimator without loss in efficiency, which works because we induce regularization for small cells and thus this is a way of automatically smoothing the highly variable weights.Comment: Published at http://dx.doi.org/10.1214/14-BA924 in the Bayesian Analysis (http://projecteuclid.org/euclid.ba) by the International Society of Bayesian Analysis (http://bayesian.org/
Panel studies typically suffer from attrition, which reduces sample size and can result in biased inferences. It is impossible to know whether or not the attrition causes bias from the observed panel data alone. Refreshment samples-new, randomly sampled respondents given the questionnaire at the same time as a subsequent wave of the panel-offer information that can be used to diagnose and adjust for bias due to attrition. We review and bolster the case for the use of refreshment samples in panel studies. We include examples of both a fully Bayesian approach for analyzing the concatenated panel and refreshment data, and a multiple imputation approach for analyzing only the original panel. For the latter, we document a positive bias in the usual multiple imputation variance estimator. We present models appropriate for three waves and two refreshment samples, including nonterminal attrition. We illustrate the three-wave analysis using the 2007-2008 Associated Press-Yahoo! News Election Poll.
Care coordination may be more challenging when the specific physicians with whom primary care physicians (PCPs) are expected to coordinate care change over time. Using Medicare data on physician patient-sharing relationships and the Dartmouth Atlas, we explored the extent to which PCPs tend to share patients with other physicians over time. We found that 70.7% of ties between PCPs and other physicians that were present in 2012 persisted in 2013, and additional shared patients in 2012 increased the odds of being connected in 2013. Regions with higher persistent ties tended to have lower rates of emergency room visits, and regions where PCPs had more physician connections were more likely to have higher emergency room visits. The results point to potential opportunities and challenges faced by health care reforms that seek to improve coordination.
Panel studies typically suffer from attrition. Ignoring the attrition can result in biased inferences if the missing data are systematically related to outcomes of interest. Unfortunately, panel data alone cannot inform the extent of bias due to attrition. Many panel studies also include refreshment samples, which are data collected from a random sample of new individuals during the later waves of the panel. Refreshment samples offer information that can be utilized to correct for biases induced by non-ignorable attrition while reducing reliance on strong assumptions about the attrition process. We present a Bayesian approach to handle attrition in two-wave panels with one refreshment sample and many categorical survey variables. The approach includes (1) an additive non-ignorable selection model for the attrition process; and (2) a Dirichlet process mixture of multinomial distributions for the categorical survey variables. We present Markov chain Monte Carlo algorithms for sampling from the posterior distribution of model parameters and missing data. We apply the model to correct attrition bias in an analysis of data from the 2007–08 Associated Press/Yahoo News election panel study.
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