Optimizing glycosylation conditions for automated glycan assembly is highly challenging, demand wasteful use of precious building blocks and rely on nontrivial analyses. We developed a semi-quantitative method for automated optimization...
Photocleavage from
polystyrene beads is a pivotal reaction for solid phase synthesis that relies on
photolabile linkers. The photocleavage, usually performed by batch irradiation,
suffers from incomplete and slow cleavage. To overcome these issues, continuous
flow and high-energy lamps are frequently used, but these setups are hazardous,
technically challenging, and expensive. We developed a photocleavage approach
that relies on a benchtop LED lamp and magnetic stirring. In this approach, we
crush the beads instead of keeping their integrity to increase the yield of
photocleavage. This approach proved very efficient for photocleavage of
protected oligosaccharides.
Solid phase synthesis is the most dominant approach for the preparation of biological oligomers as it enables the introduction of monomers iteratively. Accelerated solid phase synthesis of biological oligomers is crucial for chemical biology, but its application to the synthesis of oligosaccharides is not trivial. Solid-phase oligosaccharide assembly is a slow process performed in a variety of conditions and temperatures, requires an inert gas atmosphere, and demands high excess of glycosyl donors. The process is done in special synthesizers and poor mixing of the solid support increases the risk of diffusion-independent hydrolysis of the activated donors. High shear stirring is a new way to accelerate solid phase synthesis. The efficient mixing ensures that reactive intermediates can diffuse faster to the solid support thereby increasing the kinetics of the reactions. We report here a stirring-based accelerated solidphase oligosaccharide synthesis. We harnessed high shear mixing to perform diffusion-dependent glycosylation in a short reaction time. We minimized the use of glycosyl donors and the need to use an inert atmosphere. We showed that by tailoring the deprotection and glycosylation conditions to the same temperature, assembly steps are performed continuously, and full glycosylation cycles are completed in minutes.
Photocleavage from
polystyrene beads is a pivotal reaction for solid phase synthesis that relies on
photolabile linkers. The photocleavage, usually performed by batch irradiation,
suffers from incomplete and slow cleavage. To overcome these issues, continuous
flow and high-energy lamps are frequently used, but these setups are hazardous,
technically challenging, and expensive. We developed a photocleavage approach
that relies on a benchtop LED lamp and magnetic stirring. In this approach, we
crush the beads instead of keeping their integrity to increase the yield of
photocleavage. This approach proved very efficient for photocleavage of
protected oligosaccharides.
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