No abstract

Abnormal nutrient metabolism is a hallmark of aging, and the underlying genetic and nutritional framework is rapidly being uncovered, particularly using C. elegans as a model. However, the direct metabolic consequences of perturbations in life history of C. elegans remain to be clarified. Based on recent advances in the metabolomics field, we optimized and validated a sensitive mass spectrometry (MS) platform for identification of major metabolite classes in worms and applied it to study age and diet related changes. Using this platform that allowed detection of over 600 metabolites in a sample of 2500 worms, we observed marked changes in fatty acids, amino acids and phospholipids during worm life history, which were independent from the germ-line. Worms underwent a striking shift in lipid metabolism after early adulthood that was at least partly controlled by the metabolic regulator AAK-2/AMPK. Most amino acids peaked during development, except aspartic acid and glycine, which accumulated in aged worms. Dietary intervention also influenced worm metabolite profiles and the regulation was highly specific depending on the metabolite class. Altogether, these MS-based methods are powerful tools to perform worm metabolomics for aging and metabolism-oriented studies.

Slowing down mRNA translation in either the cytoplasm or the mitochondria are conserved longevity mechanisms. Here, we found a non-interventional natural correlation of mitochondrial and cytoplasmic ribosomal proteins (RPs) in mouse population genetics, suggesting a translational balance between these two compartments. Inhibiting mitochondrial translation in C. elegans through mrps-5 RNAi repressed overall cytoplasmic translation. Transcriptomics integrated with proteomics revealed that this inhibition specifically reduced the translational efficiency (TE) of mRNAs required in growth pathways while increasing the TE of stress response mRNAs. The coordinated repression of cytoplasmic translation is dependent on atf-5/Atf4 and is conserved in mammalian cells upon inhibiting mitochondrial translation pharmacologically with the antibiotic doxycycline. Lastly, extending this in vivo, doxycycline repressed cytoplasmic translation and RP expression in the livers of germ-free mice. These data demonstrate that inhibiting mitochondrial translation initiates an atf-5/Atf4-dependent cascade leading to coordinated repression of cytoplasmic translation, which could be targeted to promote longevity. Keywords longevity / ribosomes / mitochondrial translation / cytoplasmic translation / translational balance Highlights • Mitochondrial and cytoplasmic RP levels balance in a natural stoichiometric ratio • Blocking mitochondrial ribosomes in worms and mice reduces cytoplasmic translation • This translational balance is ATF4/atf-5 dependent and conserved in human cells • Translational efficiency of RP transcripts changes in response to ratio requirement