Aging is associated with a number of physiologic changes including perturbed circadian rhythms; however, mechanisms by which rhythms are altered remain unknown. To test the idea that circulating factors mediate age-dependent changes in peripheral rhythms, we compared the ability of human serum from young and old individuals to synchronize circadian rhythms in culture. We collected blood from apparently healthy young (age 25-30) and old (age 70-76) individuals and used the serum to synchronize cultured fibroblasts. We found that young and old sera are equally competent at driving robust ~24h oscillations of a luciferase reporter driven by clock gene promoter. However, cyclic gene expression is affected, such that young and old sera drive cycling of different genes. While genes involved in the cell cycle and transcription/translation remain rhythmic in both conditions, genes identified by STRING and IPA analyses as associated with oxidative phosphorylation and Alzheimer's Disease lose rhythmicity in the aged condition. Also, the expression of cycling genes associated with cholesterol biosynthesis increases in the cells entrained with old serum. We did not observe a global difference in the distribution of phase between groups, but find that peak expression of several clock controlled genes (PER3, NR1D1, NR1D2, CRY1, CRY2, andTEF) lags in the cells synchronized with old serum. Taken together, these findings demonstrate that age-dependent blood-borne factors affect peripheral circadian rhythms in cells and have the potential to impact health and disease via maintaining or disrupting rhythms respectively.
Memory consolidation in Drosophila can be sleep-dependent or sleep- independent, depending on the availability of food. Different regions of the mushroom body (MB) mediate these two mechanisms, with the ap α’/β’ neurons required for sleep- dependent memory consolidation in flies that are fed after training. These neurons are also involved in the increase of sleep after training, suggesting a link between sleep and memory. To better understand the mechanisms underlying sleep and memory consolidation initiation, we analyzed the transcriptome of ap α’/β’ neurons one hour after appetitive memory conditioning. A small number of genes were differentially expressed specifically in flies fed after training, but not in trained and starved flies or untrained flies. Knockdown of each of these differentially expressed genes in the ap α’/β’ neurons revealed multiple genes that affect sleep, with notable effects observed for Polr1F and Regnase-1, both of which decrease in expression after conditioning. Knockdown of Polr1F, a regulator of ribosome RNA transcription, in adult flies promotes sleep and increases pre-ribosome RNA expression as well as overall translation, supporting a function for Polr1F downregulation in memory consolidation. Conversely, knockdown of Regnase-1, an mRNA decay protein localized to the ribosome, reduces sleep. Given that Regnase-1 knockdown in ap α’/β’ neurons affects both sleep-dependent and sleep- independent memory, as well as short-term memory, Regnase-1 likely has an early role in the learning process, which may obscure a later function for its downregulation during sleep-dependent memory. These findings indicate that changes in RNA processing play a crucial role in triggering post-training sleep and memory consolidation.
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