This study describes a novel three-dimensional (3D) convolutional neural networks (CNN) based method that automatically classifies crops from spatio-temporal remote sensing images. First, 3D kernel is designed according to the structure of multi-spectral multi-temporal remote sensing data. Secondly, the 3D CNN framework with fine-tuned parameters is designed for training 3D crop samples and learning spatio-temporal discriminative representations, with the full crop growth cycles being preserved. In addition, we introduce an active learning strategy to the CNN model to improve labelling accuracy up to a required threshold with the most efficiency. Finally, experiments are carried out to test the advantage of the 3D CNN, in comparison to the two-dimensional (2D) CNN and other conventional methods. Our experiments show that the 3D CNN is especially suitable in characterizing the dynamics of crop growth and outperformed the other mainstream methods.

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Accurate crop distribution maps provide important information for crop censuses, yield monitoring and agricultural insurance assessments. Most existing studies apply low spatial resolution satellite images for crop distribution mapping, even in areas with a fragmented landscape. Unmanned aerial vehicle (UAV) imagery provides an alternative imagery source for crop mapping, yet its spectral resolution is usually lower than satellite images. In order to produce more accurate maps without losing any spatial heterogeneity (e.g., the physical boundary of land parcel), this study fuses Sentinel-2A and UAV images to map crop distribution at a finer spatial scale (i.e., land parcel scale) in an experimental site with various cropping patterns in Heilongjiang Province, Northeast China. Using a random forest algorithm, the original, as well as the fused images, are classified into 10 categories: rice, corn, soybean, buckwheat, other vegetations, greenhouses, bare land, water, roads and houses. In addition, we test the effect of UAV image choice by fusing Sentinel-2A with different UAV images at multiples spatial resolutions: 0.03 m, 0.10 m, 0.50 m, 1.00 m and 3.00 m. Overall, the fused images achieved higher classification accuracies, ranging between 10.58% and 16.39%, than the original images. However, the fused image based on the finest UAV image (i.e., 0.03 m) does not result in the highest accuracy. Instead, the 0.10 m spatial resolution UAV image produced the most accurate map. When the spatial resolution is less than 0.10 m, accuracy decreases gradually as spatial resolution decreases. The results of this paper not only indicate the possibility of combining satellite images and UAV images for land parcel level crop mapping for fragmented landscapes, but it also implies a potential scheme to exploit optimal choice of spatial resolution in fusing UAV images and Sentinel-2A, with little to no adverse side-effects.