Previous studies have found evidence of viral interference between seasonal respiratory viruses. Using laboratory-confirmed data from a Utah-based healthcare provider, Intermountain Health Care, we analyzed the time-specific patterns of respiratory syncytial virus (RSV), influenza A, influenza B, human metapneumovirus, rhinovirus, and enterovirus circulation from 2004 to 2018, using descriptive methods and wavelet analysis (n = 89,462) on a local level. The results showed that RSV virus dynamics in Utah were the most consistent of any of the viruses studied, and that the other seasonal viruses were generally in synchrony with RSV, except for enterovirus (which mostly occurs late summer to early fall) and influenza A and B during pandemic years.Viruses 2020, 12, 275 2 of 18 Materials and Methods GermWatch ® DataWe obtained weekly frequency data for six seasonal respiratory viruses (influenza A and B, RSV, metapneumovirus, enterovirus, and rhinovirus), from Intermountain Healthcare's GermWatch ® database, for the 2005-2006 winter season to the 2017-2018 winter season. We did not have data for summer 2018, nor did we have access to data at the individual level. Intermountain Healthcare is the largest health-care provider in the Intermountain West region of the United States and operates a nonprofit system of 22 hospitals and more than 190 clinics. The study was considered exempt by the Institutional Review Board at Brigham Young University.The principal laboratory methods of virus identification were direct fluorescent antibody (DFA), viral culture, and rapid antigen testing between 2000 and 2007. After 2007, polymerase chain reaction (PCR) methodology became the primary method of identification, but DFA and rapid antigen testing was still available. Due to the aggregated nature of our dataset, it is not possible to differentiate between which tests were used for each data point. However, the more sensitive method (i.e., PCR > DFA > rapid antigen testing) was used in the analysis if different methods were ordered and to exclude duplicate test results.
Previous studies have found evidence of viral interference between seasonal respiratory viruses. Using laboratory-confirmed data from a Utah-based healthcare provider, Intermountain Health Care, we analyzed the time-specific patterns of respiratory syncytial virus (RSV), influenza A, influenza B, human metapneumovirus, rhinovirus, and enterovirus circulation from 2004 to 2018, using descriptive methods and wavelet analysis (n = 89,462) on a local level. The results showed that RSV virus dynamics in Utah were the most consistent of any of the viruses studied, and that the other seasonal viruses were generally in synchrony with RSV, except for enterovirus (which mostly occurs late summer to early fall) and influenza A and B during pandemic years.
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