Nuclear factor KB (NF-KB) is a transcription factor that is critical for the inducible expression of multiple cellular and viral genes. Using the electrophoretic mobility shift assay, we demonstrated that DNA binding activity of NF-KB was abolished by proteolysis with p-and m-calpains in vitro. The proteolysis of NF-KB by calpains and hence the abolition of its DNA binding was prevented by calpastatin, calpain inhibitor I and proteasome inhibitor. We also provided evidence that calpains degrade the Cterminal domain of NF-KB by Western blot using anti-NF-KB (~65) C-terminal antibody. These observations indicate that calpains regulate gene expression through processing of NF-KB.
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