Knowledge of the physiological and morphological evolution and adaptation of nonhuman primates is critical to understand hominin origins, physiological ecology, morphological evolution, and applications in biomedicine. Particularly, limestone langurs represent a direct example of adaptations to the challenges of exploiting a high calcium and harsh environment. Here, we report a de novo genome assembly (Tfra_2.0) of a male François’s langur (Trachypithecus francoisi) with contig N50 of 16.3 Mb and resequencing data of 23 individuals representing five limestone and four forest langur species. Comparative genomics reveals evidence for functional evolution in genes and gene families related to calcium signaling in the limestone langur genome, probably as an adaptation to naturally occurring high calcium levels present in water and plant resources in karst habitats. The genomic and functional analyses suggest that a single point mutation (Lys1905Arg) in the α1c subunit of the L-type voltage-gated calcium channel Cav1.2 (CACNA1C) attenuates the inward calcium current into the cells in vitro. Population genomic analyses and RNA-sequencing indicate that EDNRB is less expressed in white tail hair follicles of the white-headed langur (T. leucocephalus) compared with the black-colored François’s langur and hence might be responsible for species-specific differences in body coloration. Our findings contribute to a new understanding of gene–environment interactions and physiomorphological adaptative mechanisms in ecologically specialized primate taxa.

Since China experienced a rapid and unprecedented process of urbanization and climate change from 1978 onwards, pest outbreaks were frequently reported on urban forests, which reflects a significant imbalance between natural regulation and human control. Based on information extracted from all journal articles and reports about insect pests on camphor tree (Cinnamomum camphora) in urban China, we characterized historical patterns and trends in pest outbreaks over large areas. Our results suggested that (1) most distribution areas of C. camphora in urban China had pest records (14 provinces) over the last 50 years, especially at the south-eastern coastal areas; (2) pests on camphor tree in urban China showed an accelerated growth since the 1990s; and (3) pests on camphor tree in urban China were characterized by native and leaf-feeding species. Urbanization seems to positively correlate with urban pest outbreaks. Changes of urban pest outbreaks could largely be described by synchronic changes of socio-economic indicators, of which CO 2 emissions as metric tons per capita is the most significant predictor, followed by GDP and human population. Thus, managers and city planners should allocate resources to socio-economic-related pest outbreaks for a sustainable ecosystem.