Brain tumor segmentation technology plays a pivotal role in the process of diagnosis and treatment of MRI brain tumors. It helps doctors to locate and measure tumors, as well as develop treatment and rehabilitation strategies. Recently, MRI brain tumor segmentation methods based on U-Net architecture have become popular as they largely improve the segmentation accuracy by applying skip connection to combine high-level feature information and low-level feature information. Meanwhile, researchers have demonstrated that introducing attention mechanism into U-Net can enhance local feature expression and improve the performance of medical image segmentation. In this work, we aim to explore the effectiveness of a recent attention module called attention gate for brain tumor segmentation task, and a novel Attention Gate Residual U-Net model, i.e., AGResU-Net, is further presented. AGResU-Net integrates residual modules and attention gates with a primeval and single U-Net architecture, in which a series of attention gate units are added into the skip connection for highlighting salient feature information while disambiguating irrelevant and noisy feature responses. AGResU-Net not only extracts abundant semantic information to enhance the ability of feature learning, but also pays attention to the information of small-scale brain tumors. We extensively evaluate attention gate units on three authoritative MRI brain tumor benchmarks, i.e., BraTS 2017, BraTS 2018 and BraTS 2019. Experimental results illuminate that models with attention gate units, i.e., Attention Gate U-Net (AGU-Net) and AGResU-Net, outperform their baselines of U-Net and ResU-Net, respectively. In addition, AGResU-Net achieves competitive performance than the representative brain tumor segmentation methods.
Automatic brain tumor segmentation on MRI is a prerequisite to provide a quantitative and intuitive assistance for clinical diagnosis and treatment. Meanwhile, 3D deep neural network related brain tumor segmentation models have demonstrated considerable accuracy improvement over corresponding 2D methodologies. However, 3D brain tumor segmentation models generally suffer from high computation cost. Motivated by a recently proposed 3D dilated multi‐fiber network (DMF‐Net) architecture that pays more attention to reduction of computation cost, we present in this work a novel encoder‐decoder neural network, ie a 3D asymmetric expectation‐maximization attention network (AEMA‐Net), to automatically segment brain tumors. We modify DMF‐Net by introducing an asymmetric convolution block into a multi‐fiber unit and a dilated multi‐fiber unit to capture more powerful deep features for the brain tumor segmentation. In addition, AEMA‐Net further incorporates an expectation‐maximization attention (EMA) module into the DMF‐Net by embedding the EMA block in the third stage of skip connection, which focuses on capturing the long‐range dependence of context. We extensively evaluate AEMA‐Net on three MRI brain tumor segmentation benchmarks of BraTS 2018, 2019 and 2020 datasets. Experimental results demonstrate that AEMA‐Net outperforms both 3D U‐Net and DMF‐Net, and it achieves competitive performance compared with the state‐of‐the‐art brain tumor segmentation methods.
As one of the fatal human diseases, early detection of brain tumors can effectively save patients’ lives. Brain tumor image segmentation is of great practical importance for physicians to perform brain tumor diagnoses quickly. Due to the data complexity of 3D brain images, it is impractical to segment out tumor regions manually, so automatic and reliable methods can be utilized instead of manual work to achieve accurate segmentation of tumor regions. In this paper, we propose an end-to-end, more efficient brain tumor MRI segmentation model, REMU-Net, for the problems of multi-scale feature extraction and difficulty in small target feature extraction in 3D brain tumor image segmentation. Firstly, design and use the multi-channel parallel M-RepVGG module as a decoder to achieve multi-scale feature fusion. Secondly, embedding dilated convolution with different dilated rates in the DM-RepVGG module of the encoder to better extract features at different scales. Finally, introduce the expectation-maximizing attention in the network to better extract the features of the internal details of the tumor. The experimental results on the BraTS2018 validation dataset are Dice scores of 80.93%, 90.13%, and 86.15%, respectively. Experimental results on the BraTS2019 validation dataset can be achieved with Dice scores of 78.29%, 90.65%, and 82.77%, respectively.
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