The interest in functional supramolecular systems for the design of innovative materials and technologies, able to fundamentally change the world, is growing at a high pace. The huge array of publications that appeared in recent years in the global literature calls for systematization of the structural trends inherent in the formation of these systems revealed at different molecular platforms and practically useful properties they exhibit. The attention is concentrated on the topics related to functional supramolecular systems that are actively explored in institutes and universities of Russia in the last 10–15 years, such as the chemistry of host–guest complexes, crystal engineering, self-assembly and self-organization in solutions and at interfaces, biomimetics and molecular machines and devices.
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Eleven amide and thioamide derivatives with monoterpene and adamantine substituents were synthesised. They were tested for their activity against the tyrosyl-DNA phosphodiesterase 1 DNA (Tdp1) repair enzyme with the most potent compound 47a, having an IC50 value of 0.64 M. When tested in the A-549 lung adenocarcinoma cell line, no or very limited cytotoxic effect was observed for the ligands. However, in conjunction with topotecan, a well-established Topoisomerase 1 (Top1) poison in clinical use against cancer, derivative 46a was very cytotoxic at 5 M concentration, displaying strong synergism. This effect was only seen for 46a (IC50—3.3 M) albeit some other ligands had better IC50 values. Molecular modelling into the catalytic site of Tdp1 predicted plausible binding mode of 46a, effectively blocking access to the catalytic site.
Background and Objective:
The DNA repair enzyme tyrosyl-DNA-phosphodiesterase 1 (TDP1) is a
current inhibition target to improve the efficacy of cancer chemotherapy. Previous studies showed that compounds
combining adamantane and monoterpenoid fragments are active against TDP1 enzyme. This investigation
is focused on the synthesis of monoterpenoid derived esters of 1-adamantane carboxylic acid as TDP1 inhibitors.
Methods:
New esters were synthesized by the interaction between 1-adamantane carboxylic acid chloride and
monoterpenoid alcohols. The esters were tested against TDP1 and its binding to the enzyme was modeling.
Results:
13 Novel ester-based TDP1 inhibitors were synthesized with yields of 21–94%; of these, nine esters
had not been previously described. A number of the esters were found to inhibit TDP1, with IC50 values ranging
from 0.86–4.08 µM. Molecular modelling against the TDP1 crystal structure showed a good fit of the active
esters in the catalytic pocket, explaining their potency. A non-toxic dose of ester, containing a 3,7-
dimethyloctanol fragment, was found to enhance the cytotoxic effect of topotecan, a clinically used anti-cancer
drug, against the human lung adenocarcinoma cell line A549.
Conclusion:
The esters synthesized were found to be active against TDP1 in the lower micromolar concentration
range, with these findings being corroborated by molecular modeling. Simultaneous action of the ester
synthesized from 3,7-dimethyloctanol-1 and topotecan revealed a synergistic effect.
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