Myosin XI are actin-based molecular motors that are thought to drive organelle movements in plants, analogous to myosin V in animals and fungi. Similar domain structure of these myosins suggests that binding to organelles may occur via the globular tail domain in both types of motors, even though sequence similarity is low. To address this hypothesis, we developed a structure homology model for the globular tail of MYA1, a myosin XI from Arabidopsis, based on the known structure of yeast myosin V (Myo2p) globular tail. This model suggested an interaction between two subdomains of the globular tail which was verified by yeast two-hybrid assay and by in vivo bimolecular fluorescence complementation (BiFC). Interface mapping demonstrated that this subdomain interaction depends critically on the C terminus of helix H6 as well as three specific residues in helices H3 and H15, consistent with the structural prediction. The reconstituted globular tails of several Arabidopsis myosin XIs in BiFC assays targeted to peroxisomes in plant cells, identifying this domain as sufficient for cargo binding. Unlike myosin V, either subdomain of myosin XI alone was targeting-competent and responsible for association with different organelles. In addition, our data suggest that organelle binding is regulated by an allosteric interaction between two tail subdomains. We conclude that the globular tail of myosin XI shares a similar structure with that of myosin V, but has evolved plant-specific cargo binding mechanisms.Myosins are efficient molecular motor proteins which convert chemical energy from ATP hydrolysis to physical force to move along cytoskeletal actin filaments (1). Based on sequence comparison of myosin motor domains, these nearly ubiquitous eukaryotic motors can be grouped into 24 subfamilies designated as class I to XXIV (2). Plants from green algae to flowering plants encode only two classes, myosin VIII and XI (3). A number of myosin XI isoforms have been identified from a variety of organisms by biochemical isolation (4, 5), molecular cloning (6 -8), or genome-wide sequence analysis (9, 10). Little is known about the specific cellular function of class XI myosins in plants, but it is generally assumed that they are responsible for force generation for organelle transport during cytoplasmic streaming (11).This assumption is based on three lines of evidence. First, disruption of organelle movements in plant cells by anti-actin drug or myosin ATPase inhibitor treatment strongly indicated that organelle motility depends on both actin and myosin (12-16). Second, myosin XI was found to associate with a diverse array of organelles in plant cells by immunostaining (17-20), YFP labeling (21), and co-purification studies (22). Finally, there is an overall structural similarity between class XI and class V myosins, the latter being responsible for organelle movement in fungi and animals (23). In particular: (i) both classes have the same domain arrangement, including a catalytic motor in the head, six copies of calmodulin bindin...