Two novel phytases have been characterized from Bifidobacterium pseudocatenulatum and Bifidobacterium longum subsp. infantis. The enzymes belong to a new subclass within the histidine acid phytases, are highly specific for the hydrolysis of phytate, and render myo-inositol triphosphate as the final hydrolysis product. They represent the first phytases characterized from this group of probiotic microorganisms, opening the possibilities for their use in the processing of high-phytate-content foods.
Phytases are a special class of phosphatases that catalyze the sequential hydrolysis of myo-inositol hexakis phosphate (InsP 6 ) or phytate, the major form of phosphorous storage in plants, to lower myo-inositol phosphate derivatives. Based on biochemical properties and amino acid sequence, phytases can be categorized into two major classes, the histidine acid phytases and the alkaline phytases (9). The use of commercial phytases of fungal origin (usually Trichoderma and Aspergillus strains) is a common practice in animal feeding for improving the bioaccessibility of minerals (zinc, iron, calcium, and magnesium) that are otherwise chelated by InsP 6 and InsP 5 and insolubilized (4, 13). The presence of phytase activity has recently been reported to occur in the human intestinal Bifidobacterium pseudocatenulatum ATCC 27919 and Bifidobacterium longum subsp. infantis ATCC 15697 strains (5, 7). These bacteria were included in the production process of whole-wheat bread, showing their potential to reduce phytate content in fiber-rich products for human consumption (15, 16). However, no genetic information about the corresponding enzymes was available.Identification and purification of bifidobacterial phytases. When the genomes from B. pseudocatenulatum ATCC 27919 (GenBank accession no. NZ_ABXX02000003) and B. longum subsp. infantis ATCC 15697 (GenBank accession no. CP001095) were being searched for the presence of genes encoding putative phosphatases, two genes (BIFPSEUDO_03792 and BLON_0263, designated hereinafter PhypA and PhylA, respectively) attracted our attention. These genes encoded two proteins with 59% amino acid identity which possessed histidine acid phosphatase (HAP) domains (PF00328). Furthermore, PhypA and PhylA displayed N-terminal signal peptides for secretion and a predicted C-terminal sortase-dependent cell wall-anchoring domain. Initial characterization of the phytase activity in both bifidobacterial strains revealed that it was mainly located at the cell wall/membrane fractions (data not shown). Hence, the identified genes were good candidates for encoding the bifidobacterial phytases.Sequence analysis additionally showed that the typical HAP signature sequence of the histidine-containing catalytic site (RH GXRXP) was replaced by RHGSRGL in PhypA and PhylA and that the aspartate of the C-terminal HD domain was replaced by alanine. Remarkably, the putative HAP homologues closer to PhylA and PhypA found in databases, belonging to the Actinobacteria, Betaproteobacteria, and Gammaproteobacteria, show the same...