A comprehensive assessment of fungi in urban sewer biofilms: Community structure, environmental factors, and symbiosis patterns

Ren, Bo; Shi, Xuan; Chi, Yulei; Ren, Tong; Jin, Xin; Wang, Xiaochang C.; Jin, Pengkang

doi:10.1016/j.scitotenv.2021.150728

Cited by 7 publications

(1 citation statement)

References 20 publications

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“…Relative abundances of specific samples were computed using the “arrange” function from dplyr package and visualized using ggplot2 package ( 50 ), and the α-diversity index was calculated using the diversity function of the vegan package ( 51 ). The Bray-Curtis distances were computed for PCoA by using the “vegdist” function in vegan package and the “pcoa” function in ape package and then plotted using ggplot2 package ( 52 ). Venn diagrams were generated, using R package “venn,” to visualize the shared and unique genera before and after the specific plant species were added to the dye vat.…”

Section: Methodsmentioning

confidence: 99%

Fermentation Blues: Analyzing the Microbiota of Traditional Indigo Vat Dyeing in Hunan, China

Shi

Huang

et al. 2022

Microbiol Spectr

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Chemical reducing agents included in modern indigo dyeing to initiate indigo reduction can be harmful to both human health and the environment. Given that traditional indigo dyeing involves natural fermentation in a dye vat using natural organic additives without the use of toxic chemicals and that changes in the microbiota during traditional indigo fermentation potently affect the onset of indigo reduction, elucidation of these microbial community transitions could help develop methods to control the initiation of indigo reduction.

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Section: Methodsmentioning

confidence: 99%