2019
DOI: 10.7554/elife.39695
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A first order phase transition mechanism underlies protein aggregation in mammalian cells

Abstract: The formation of misfolded protein aggregates is a hallmark of neurodegenerative diseases. The aggregate formation process exhibits an initial lag phase when precursor clusters spontaneously assemble. However, most experimental assays are blind to this lag phase. We develop a quantitative assay based on super-resolution imaging in fixed cells and light sheet imaging of living cells to study the early steps of aggregation in mammalian cells. We find that even under normal growth conditions mammalian cells have … Show more

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Cited by 93 publications
(100 citation statements)
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References 67 publications
(102 reference statements)
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“…We then investigated the effect of YTHDF proteins on the formation of G3BP1 clusters in the framework of the classical nucleation theory for first-order phase transitions 41,42 . In this model, the Gibbs free energy change (ΔG) for the formation of clusters with a specific radius (R) contains two terms -a surface energy term and a bulk energy term: ΔG = aR 2 + bR 3 (Fig.…”
Section: Blocking M 6 A-binding Of Ythdf Impedes Sg Formationmentioning
confidence: 99%
“…We then investigated the effect of YTHDF proteins on the formation of G3BP1 clusters in the framework of the classical nucleation theory for first-order phase transitions 41,42 . In this model, the Gibbs free energy change (ΔG) for the formation of clusters with a specific radius (R) contains two terms -a surface energy term and a bulk energy term: ΔG = aR 2 + bR 3 (Fig.…”
Section: Blocking M 6 A-binding Of Ythdf Impedes Sg Formationmentioning
confidence: 99%
“…This process is generally described as nucleation-dependent polymerization, where the protein needs to access a metastable conformation in order to trigger aggregation. Once this state is achieved, the reaction proceeds rapidly to completion as a first-order reaction [30][31][32][33].…”
Section: Stable Assemblies: Amyloid Fibersmentioning
confidence: 99%
“…• Super-resolution microscopy (PALM and STORM) has been applied to living cells to measure the growth of amyloid fibrils [115,116] and visualize the nucleation process [33].…”
Section: Evolutionmentioning
confidence: 99%
“…0, then the system is metastable and phase separation occurs through a process termed nucleation and growth (44). Few studies have explored the dynamics of LLPS within living cells, but among the few is recent work at the interface of physics and biology that applies classical nucleation theory to protein aggregation in living cells (48).…”
Section: Background On the Thermodynamics Of Phase Separationmentioning
confidence: 99%