2001
DOI: 10.1038/35057024
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A genomic perspective on membrane compartment organization

Abstract: Now that whole genome sequences are available for many eukaryotic organisms from yeast to man, we can form broad hypotheses on the basis of the relative expansion of protein families. To investigate the molecular mechanisms responsible for the organization of membrane compartments, we identified members of the SNARE, coat complex, Rab and Sec1 protein families in four eukaryotic genomes. Of these families only the Rab family expanded from the unicellular yeast to the multicellular fly and worm. All families we… Show more

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Cited by 619 publications
(539 citation statements)
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“…Interestingly, expression of a dominant-interfering Exo70 protein or siRNA-mediated knockdowns did not prevent GLUT4 vesicle trafficking to the plasma membrane but did inhibit GLUT4 plasma membrane fusion whereas over expression of Sec6 and Sec8 enhanced GLUT4 translocation to the plasma membrane [33,35]. Although these data indicate that the Exocyst complex plays an important role in the insulin-regulated plasma membrane docking/tethering of GLUT4 vesicles, it is well established the physiologic minimal fusion machinery is dependent upon the assembly of the SNARE complex [36][37][38] SNARE proteins can be generally classified as v-SNAREs (or R-SNAREs) that possess a single coil-coiled domain and a transmembrane domain that are localized in vesicle compartment [39][40][41][42]. The second family, t-SNAREs (or Q-SNAREs) are dimeric, with one partner belongs to the family of syntaxin isoforms and the second partner belonging to the family of SNAP isoform.…”
Section: Glut4 Vesicle Docking and Plasma Membrane Fusionmentioning
confidence: 99%
“…Interestingly, expression of a dominant-interfering Exo70 protein or siRNA-mediated knockdowns did not prevent GLUT4 vesicle trafficking to the plasma membrane but did inhibit GLUT4 plasma membrane fusion whereas over expression of Sec6 and Sec8 enhanced GLUT4 translocation to the plasma membrane [33,35]. Although these data indicate that the Exocyst complex plays an important role in the insulin-regulated plasma membrane docking/tethering of GLUT4 vesicles, it is well established the physiologic minimal fusion machinery is dependent upon the assembly of the SNARE complex [36][37][38] SNARE proteins can be generally classified as v-SNAREs (or R-SNAREs) that possess a single coil-coiled domain and a transmembrane domain that are localized in vesicle compartment [39][40][41][42]. The second family, t-SNAREs (or Q-SNAREs) are dimeric, with one partner belongs to the family of syntaxin isoforms and the second partner belonging to the family of SNAP isoform.…”
Section: Glut4 Vesicle Docking and Plasma Membrane Fusionmentioning
confidence: 99%
“…There are 36 SNAREs in humans [2,14]. Individuals of the SNARE family localize to distinct subcellular organelles in the secretory pathway, suggesting that they have selective roles in specific intracellular trafficking steps [15].…”
Section: Introductionmentioning
confidence: 99%
“…These proteins are members of the SNARE protein family that are involved in all fusion events of the secretory pathway. SNAREs are characterized by stretches of 60-70 amino acids arranged in heptad repeats, termed SNARE motifs (Weimbs et al, 1997;Fasshauer et al, 1998b;Bock et al, 2001;Day et al, 2006). Syntaxin and synaptobrevin each contain a single SNARE motif that is located adjacent to a C-terminal transmembrane domain.…”
Section: Introductionmentioning
confidence: 99%