Three-dimensional compressible flow simulations were conducted to develop a Hyperloop pod. The novelty is the usage of Gamma transition model, in which the transition from laminar to turbulent flow can be predicted. First, a mesh dependency study was undertaken, showing second-order convergence with respect to the mesh refinement. Second, an aerodynamic analysis for two designs, short and optimized, was conducted with the traveling speed 125 m/s at the system pressure 0.15 bar. The concept of the short model was to delay the transition to decrease the frictional drag; meanwhile that of the optimized design was to minimize the pressure drag by decreasing the frontal area and introduce the transition more toward the front of the pod. The computed results show that the transition of the short model occurred more on the rear side due to the pod shape, which resulted in 8% smaller frictional drag coefficient than that for the optimized model. The pressure drag for the optimized design was 24% smaller than that for the short design, half of which is due to the decrease in the frontal area, and the other half is due to the smoothed rear-end shape. The total drag for the optimized model was 14% smaller than that for the short model. Finally, the influence of the system pressure was investigated. As the system pressure and the Reynolds number increase, the frictional drag coefficient increases, and the transition point moves toward the front, which are the typical phenomena observed in the transition regime.