We have isolated and characterized overlapping cDNA clones encoding the ␣3A and ␣3B chains of mouse laminin 5. Sequence analysis of the cDNA for the ␣3B predicts a polypeptide of 2541 amino acids (279,510 Da) comprising a truncated short arm and a carboxyl-terminal long arm common to the laminin ␣ chains identified thus far. The short arm of the ␣3B chain harbors two alternating epidermal growth factor-like domains and two globular domains. The amino-terminal globular domain, thought to mediate interactions with molecules of the extracellular matrix, shows no significant homology to any globular domain at the tips of the known laminin isoforms. The ␣3A cDNA predicts a polypeptide of 1711 amino acids (186,230 Da) that substitutes a short sequence of 43 amino acids for the short arm seen in the ␣3B isoform and displays 77% conservative homology to the ␣3Ep chains of the adhesion ligand epiligrin. Northern and Western blot analyses of skin and lung epithelial cells demonstrated the tissue-specific expression of the laminin ␣3A and ␣3B isoforms, and in situ hybridization on mouse embryos revealed a focal localization of ␣3B in areas of the central nervous system.