We describe a novel genetic and kinetic defect in a slow-channel congenital myasthenic syndrome. The severely disabled propositus has advanced endplate myopathy, prolonged and biexponentially decaying endplate currents, and prolonged acetylcholine receptor (AChR) channel openings. Genetic analysis reveals the heterozygous mutation ␣V249F in the propositus and mosaicism for ␣V249F in the asymptomatic father. Unlike mutations described previously in the M2 transmembrane domain, ␣V249F is located N-terminal to the conserved leucines and is not predicted to face the channel lumen. Expression of the ␣V249F AChR in HEK fibroblasts demonstrates increased channel openings in the absence of ACh, prolonged openings in its presence, enhanced steady-state desensitization, and nanomolar rather than micromolar affinity of one of the two binding sites in the resting activatable state. Thus, neuromuscular transmission is compromised because cationic overloading leads to degenerating junctional folds and loss of AChR, because an increased fraction of AChR is desensitized in the resting state, and because physiological rates of stimulation elicit additional desensitization and depolarization block of transmission.Key words: slow-channel congenital myasthenic syndrome; neuromuscular transmission; endplate myopathy; acetylcholine receptor ␣ subunit gene; mutation analysis; single-channel recording; desensitization; agonist binding affinity Recent studies of congenital myasthenic syndromes (CMS) revealed mutations in acetylcholine receptor (AChR) subunit genes that either reduce expression of AChR (Engel et al., 1996a) or alter its kinetic properties to decrease (Ohno et al., 1996) or increase Sine et al., 1995; Engel et al., 1996b;Gomez et al., 1996) the response to ACh. Mutations that increase response to ACh prolong elementary activation episodes, and these disorders are referred to as slow-channel C MS (SCCMS). Mutations underlying SCC MS have been identified in different AChR subunits, and in different domains of the subunits, and affect AChR f unction through different mechanisms. The mutation ␣G153S is in the major extracellular domain and near residues that contribute to ligand binding; it increases affinity of ACh for the resting closed state and prolongs activation episodes by allowing multiple reopenings before ACh can dissociate . The mutation ␣N217K is in the M1 transmembrane domain and both slows the rate of channel closing and allows multiple reopenings per activation episode (Engel et al., 1996b). Mutations in the M2 domain, ⑀T264P, ⑀L269F, and V266M Engel et al., 1996b), increase spontaneous opening of the channel, increase apparent affinity for ACh, and slow the rate of channel closing.Here we describe and functionally characterize the mutation ␣V249F in the M2 domain that causes severe SCCMS through a novel combination of mechanisms. Our mechanistic studies reveal functional consequences attributable to local perturbation of the M2 domain, including increased opening in the absence and prolonged opening in the p...