The internal ribosome entry site (IRES) of porcine teschovirus 1 (PTV-1), a member of the Picornaviridae family, is quite distinct from other well-characterized picornavirus IRES elements, but it displays functional similarities to the IRES from hepatitis C virus (HCV), a member of the Flaviviridae family. In particular, a dominant negative mutant form of eIF4A does not inhibit the activity of the PTV-1 IRES. Furthermore, there is a high level (ca. 50%) of identity between the PTV-1 and HCV IRES sequences. A secondary-structure model of the whole PTV-1 IRES has been derived which includes a pseudoknot. Validation of specific features within the model has been achieved by mutagenesis and functional assays. The differences and similarities between the PTV-1 and HCV IRES elements should assist in defining the critical features of this type of IRES.Porcine teschovirus 1 (PTV-1) Talfan is the prototype member of the Teschovirus genus within the Picornaviridae family. PTV infection results in polioencephalomyelitis in swine, and there have been recent incidents of disease (resulting in paralysis or mortality) in both the United States and Japan (28,42). Multiple serotypes of teschoviruses have been identified, and nearly complete genome sequences are available for a variety of strains (6,14,20,43). The 5Ј-terminal region of the genome sequence is missing in each case, and it is possible that a poly(C) tract is present within the 5Ј untranslated region of the viral RNA in at least some strains (6, 43).Picornavirus genomes are infectious and function as mRNAs. Initiation of protein synthesis on picornavirus RNA is dependent on an internal ribosome entry site (IRES) (see reference 2 for a review). Several different classes of picornavirus IRES element have been described. With the exception of the PTV-1 IRES (see below), they are all large, complex RNA structures of about 450 nucleotides (nt) which contain a polypyrimidine tract located about 20 nt upstream of an AUG codon at the 3Ј end of the element. (Note that in the cardio-and aphthovirus elements, this AUG is an initiation codon, but in the enteroand rhinoviruses, the AUG codon is not usually recognized and initiation occurs at the next AUG codon.) The poliovirus (PV) and human rhinovirus elements represent one class of IRES; these elements function poorly in the rabbit reticulocyte lysate (RRL) in vitro translation system unless it is supplemented with additional proteins (e.g., from HeLa cell extracts). In contrast, the cardio-and aphthovirus IRES elements (e.g., from encephalomyocarditis virus [EMCV] and foot-and-mouth disease virus [FMDV]) do function very efficiently in the standard RRL translation system and they have a secondary structure different from that of the entero-and rhinovirus IRES elements. The hepatitis A virus IRES is distinct again; most notably, it requires the intact translation initiation complex eIF4F (1, 3), whereas the other picornavirus IRES elements function when the eIF4G component of this complex has been cleaved or the cap-binding pro...