The centriole in eukaryotes functions as the cell's microtubule-organizing center (MTOC) to nucleate spindle assembly, and its biogenesis requires an evolutionarily conserved protein, SAS-6, which assembles the centriole cartwheel. Trypanosoma brucei, an early branching protozoan, possesses the basal body as its MTOC to nucleate flagellum biogenesis. However, little is known about the components of the basal body and their roles in basal body biogenesis and flagellum assembly. Here, we report that the T. brucei SAS-6 homolog, TbSAS-6, is localized to the mature basal body and the probasal body throughout the cell cycle. RNA interference (RNAi) of TbSAS-6 inhibited probasal body biogenesis, compromised flagellum assembly, and caused cytokinesis arrest. Surprisingly, overexpression of TbSAS-6 in T. brucei also impaired probasal body duplication and flagellum assembly, contrary to SAS-6 overexpression in humans, which produces supernumerary centrioles. Furthermore, we showed that depletion of T. brucei Polo-like kinase, TbPLK, or inhibition of TbPLK activity did not abolish TbSAS-6 localization to the basal body, in contrast to the essential role of Polo-like kinase in recruiting SAS-6 to centrioles in animals. Altogether, these results identified the essential role of TbSAS-6 in probasal body biogenesis and flagellum assembly and suggest the presence of a TbPLK-independent pathway governing basal body duplication in T. brucei.T rypanosoma brucei is an early branching microbial eukaryote and the causative agent of sleeping sickness in humans and nagana in cattle in sub-Saharan Africa. A trypanosome cell possesses a motile flagellum that is nucleated by the basal body, the cell's microtubule organizing center (MTOC), exits the cell body through the flagellar pocket, and is attached to the cell body along most of its length via a specialized cytoskeletal structure termed the flagellum attachment zone (FAZ). The flagellum is composed of a canonical 9 ϩ 2 microtubule axoneme and an extra-axoneme structure termed the paraflagellar rod (PFR), and it is required for cell morphogenesis, cell motility, and cytokinesis (1, 2). Early in the cell cycle, a trypanosome cell possesses a basal body, which nucleates the flagellum axoneme, and an associated probasal body. The probasal body matures to a basal body when the cell proceeds to S phase of the cell cycle; subsequently, two probasal bodies are formed, each of which associates with each of the two mature basal bodies (3, 4). A new flagellum then is assembled from the newly matured basal body, which then undergoes a rotation toward the posterior of the old basal body. Following the elongation of the new flagellum, the new basal body/probasal body pair moves toward the posterior portion of the cell, which constitutes one of the first cytoskeletal events in the cell cycle of T. brucei (3, 4). Movement of the basal body is required for cell morphogenesis (4) and for segregation of the kinetoplast, the cell's mitochondrial genome that is attached to the basal body through a struc...