SummaryObjectivePatients with genetic generalized epilepsy (GGE) have subtle morphologic abnormalities of the brain revealed with magnetic resonance imaging (MRI), particularly in the thalamus. However, it is unclear whether morphologic abnormalities of the brain in GGE are a consequence of repeated seizures over the duration of the disease, or are a consequence of treatment with antiepileptic drugs (AEDs), or are independent of these factors. Therefore, we measured brain morphometry in a cohort of AEDânaive patients with GGE at disease onset. We hypothesize that drugânaive patients at disease onset have gray matter changes compared to ageâmatched healthy controls.MethodsWe performed quantitative measures of gray matter volume in the thalamus, putamen, caudate, pallidum, hippocampus, precuneus, prefrontal cortex, precentral cortex, and cingulate in 29 AEDânaive patients with newâonset GGE and compared them to 32 ageâmatched healthy controls. We subsequently compared the shape of any brain structures found to differ in gray matter volume between the groups.ResultsThe thalamus was the only structure to show reduced gray matter volume in AEDânaive patients with newâonset GGE compared to healthy controls. Shape analysis revealed that the thalamus showed deflation, which was not uniformly distributed, but particularly affected a circumferential strip involving anterior, superior, posterior, and inferior regions with sparing of medial and lateral regions.SignificanceStructural abnormalities in the thalamus are present at the initial onset of GGE in AEDânaive patients, suggesting that thalamic structural abnormality is an intrinsic feature of GGE and not a consequence of AEDs or disease duration.