The soil organic carbon (SOC) pool of the Northern Hemisphere contains about half of the global SOC stored in soils. As the Arctic is exceptionally sensitive to global warming, temperature rise and prolonged summer lead to deeper thawing of permafrost-affected soils and might contribute to increasing greenhouse gas emissions progressively. To assess the overall feedback of soil organic carbon stocks (SOCS) to global warming in permafrost-affected regions the spatial variation in SOCS at different environmental scales is of great interest. However, sparse and unequally distributed soil data sets at various scales in such regions result in highly uncertain estimations of SOCS of the Northern Hemisphere and here particularly in Greenland. The objectives of this study are to compare and evaluate three controlling factors for SOCS distribution (vegetation, landscape, aspect) at two different scales (local, regional). The regional scale reflects the different environmental conditions between the two study areas at the coast and the ice margin. On the local scale, characteristics of each controlling factor in form of defined units (vegetation units, landscape units, aspect units) are used to describe the variation in the SOCS over short distances within each study area, where the variation in SOCS is high. On a regional scale, we investigate the variation in SOCS by comparing the same units between the study areas. The results show for both study areas that SOCS are with 8 kg m -2 in the uppermost 25 cm and 16 kg m -2 in the first 100 cm of the soil, i.e., 3 to 6 kg m -2 (37.5%) higher than existing large scale estimations of SOCS in West Greenland. Our approach allows to rank the scale-dependent importance of the controlling factors within and between the study areas. However, vegetation and aspect better explain variations in SOCS than landscape units. Therefore, we recommend vegetation and aspect for determining the variation in SOCS in West Greenland on both scales.