After binding to cellular receptors and proteolytic activation, the protective antigen component of anthrax toxin forms a heptameric prepore. The prepore later undergoes pH-dependent conversion to a pore, mediating translocation of the edema and lethal factors to the cytosol. We describe structures of the prepore (3.6 Å) and a prepore:receptor complex (4.3 Å) that reveal the location of poreforming loops and an unexpected interaction of the receptor with the pore-forming domain. Lower pH is required for prepore-topore conversion in the presence of the receptor, indicating that this interaction regulates pH-dependent pore formation. We present an example of a receptor negatively regulating pH-dependent membrane insertion.M any bacteria that colonize mammalian hosts have evolved mechanisms for introducing bacterial enzymes into the cytosolic compartment of host cells. These enzymes disrupt metabolism in various ways, disabling professional phagocytes and͞or other cells of the host's immune system. Bacillus anthracis accomplishes this disruption by secreting a tripartite toxinanthrax toxin, consisting of two intracellularly acting enzymes together with a multifunctional protein that delivers the enzymes to the cytosol (1). The two enzymes are: edema factor (EF, 89 kDa), an adenylate cyclase (2), and lethal factor (LF, 90 kDa), a metalloprotease specific for mitogen-activated protein kinase kinases (3, 4). The delivery component, termed protective antigen (PA, 83 kDa), is a receptor-binding protein that forms a pore in the endosomal membrane, enabling EF and LF to cross to the cytosol.PA, EF, and LF combine at the surface of receptor-bearing cells to form a series of toxic noncovalent complexes (1). PA is a four-domain molecule that binds to either of two cell-surface receptors, capillary morphogenesis protein 2 (CMG2) or anthrax toxin receptor͞tumor endothelial marker 8 (ATR͞TEM8) (5-7). Proteolysis at a furin-sensitive cleavage site within domain 1 (residues 1-258) removes a 20-kDa fragment, PA 20 , from the N terminus (8), leaving a 63-kDa fragment, PA 63 , bound to the receptor. The remaining part of domain 1 (residues 168-258) forms the N terminus of PA 63 and functions in oligomerization and in binding EF and LF (Fig. 1a). In the absence of PA 20 , PA 63 self-associates to form a ring-shaped heptamer (9), termed the prepore, the structure of which was previously determined at 4.5 Å (5). Domain 2 (residues 259-487) has a -barrel core structure and lines the lumen of the heptamer (Fig. 1 a and b). There is a large amphipathic loop between strands 22 and 23 (residues 302-323) that is disordered in the crystal structure of monomeric PA and is believed to insert into the membrane as a hairpin to generate a 14-stranded -barrel pore (10) (Fig. 1a). For this loop to reach and span the membrane, the 22 and 23 strands are predicted to peel away from the domain 2 core and, together with 21, 24, and the amphipathic hairpin, form an extended -barrel involving residues 285-340 (5, 10, 11). Domain 3 (residues 488-59...