Studies with purified chioroplasts of Lupinuspolyphyllw LINDL. leaflets indicate that the first two enzymes of quinolizidine alkaloid biosynthesis, lysine decarboxylase and 17-oxosparteine synthase, are localized in the chloroplast stroma. Thus, both enzymes share the same subcellular compartment as the biosynthetic pathway of lysine, the precursor of quinolizidine alkaloids. The activity of diaminopimelate decarboxylase, the final enzyme in lysine biosynthesis, is about two to three orders of magnitude higher than that of the enzymes of alkaloid formation.Tetracyclic quinolizidine alkaloids such as lupanine are derived from lysine via the symmetrical intermediate cadaverine ( Fig. 1 About 30 ml of the homogenate, pipetted into 40-ml centrifuge tubes, was underlayered with 10 ml Percoll solution according to Mills and Joy (6) (40% v/v Percoll, 330 mM D-mannitol, 50 mm Tricine, pH 7.9, 0.1% w/v BSA). Intact chloroplasts were pelleted by centrifugation at 2,500g for 2 min in a RC-5B centrifuge (Sorvall) equipped with the fixed-angle rotor SS 34. The supernatant and then the Percoll layer were removed by aspiration. The chloroplast pellet was resuspended in the following buffer solution by repeated pipetting: 330 mM D-mannitol, 5 mM ascorbate, 2 mM EDTA, 20 mm NaCl, 1 mM MgCl2, 1 mrm MnCl2, 2 mm NaNO3, 50 mM Hepes (pH 7.6). This fraction was designated as the fraction containing 'intact chloroplasts' (6).Gradient-Centrifugation. About 2 ml of the above chloroplast solution was layered onto a discontinuous sucrose gradient (5 ml 57% w/v sucrose, 6 ml 50% sucrose, 6 ml 43% sucrose, 6 ml 33% sucrose, and 8 ml 20% sucrose in 50 mm Tricine [pH 8] each). Centrifugation in a SS 90 vertical rotor was performed at 18,000 rpm for 30 min in a Sorvall RC-5B centrifuge equipped with a special rate controller. An Isco model UA 5 fractionator was used to fractionate the gradients. Fractions of 2 ml were collected.Isolation of Chloroplast Stroma and Thylakoids. Intact chloroplasts were isolated by the Percoll method. The chloroplast pellet was suspended in 35 ml hypotonic buffer (10 mm Tricine, pH 7.6, 4 mM MgCI2) and left standing in an ice-bath for 10 min. The chloroplasts were further disrupted with a Potter homogenator (one stroke), and 9 ml were layered onto a discontinuous sucrose gradient, consisting of 4 ml 1.5 M sucrose, 5 ml 1.2 M sucrose, 7 ml 0.93 M sucrose, and 9 ml 0.6 M sucrose in 10 mm Tricine (pH 7.6) and 4 mm MgCl2. The gradients were centrifuged in the SS 90 vertical rotor for 20 mim at 15,000 rpm. We assume that the upper fractions of the gradient, which contain tne soluble portion of the chloroplasts, represent the stroma, whereas the lower dark green band contains mainly the thylakoids (3). We were not able to recover a fraction containing the chloroplast envelopes. Stromal and thylakoid fractions were removed by aspiration. The thylakoid fraction was suspended in 15 ml 0.1 M phosphate buffer (pH 8) and centrifuged for 10 min at 10,000g. The resulting pellet was resuspended in 8 ml phosphate buffer...