Allele frequencies of the new European Standard Set (ESS) loci plus SE33 locus in a population from the Republic of Macedonia

Jakovski, Zlatko; Nikolova, Ksenija; Jankova-Ajanovska, Renata; Janeska, Biljana; Pojskić, Naris; Marjanović, Damir

doi:10.1016/j.fsigen.2011.07.004

Cited by 7 publications

(3 citation statements)

References 12 publications

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“…A total of 14 off‐ladder alleles, which were not included in the Investigator HDplex kit ladder, were observed and sequenced for confirmation. The following were novel alleles that had never been reported previously: 8, 9.2, and 10.2 at D4S2366; 15 and 22.2 at D7S1517; 15.1 at D8S1132; 18, 20, and 20.1 at D10S2325; 28 at D12S391; 17.3 at D8S51; 22 and 38 at D21S2055; and 29 at SE33 .…”

Section: Allele Frequencies and Forensic Parameters For The 12 Autosomentioning

confidence: 60%

“…Supporting Information Table S2 shows the locus‐by‐locus estimates of the exact p ‐values comparing pairs of population groups. p ‐values from locus‐by‐locus comparisons between Shanghai Han ( n = 484) and other foreign groups, including populations from Central Poland , Old Believers , Germany , Southern Brazil , Nicaragua (Central America) , the Republic of Macedonia , and Japan show that significant differences were observed at all the loci, except D3S1744 in the Old Believers.…”

Section: Allele Frequencies and Forensic Parameters For The 12 Autosomentioning

confidence: 99%

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Genetic polymorphisms in 12 autosomal STRs in a Shanghai Han population from China

Zhang

Zhang²,

Zhao

et al. 2013

Electrophoresis

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In this study, a total of 484 unrelated healthy individuals and 359 two-generation families in the Han population in Shanghai, China were successfully analyzed with the Investigator HDplex Kit (Qiagen, Hilden, Germany). Hardy-Weinberg equilibrium tests demonstrated no significant deviation from expected values (p > 0.05) for the 12 autosomal STRs included in this kit. A total of 173 alleles were detected in 12 autosomal STR loci; the largest number of alleles (32) was detected for the SE33 locus. The combined power of discrimination was 0.99999999992. The combined mean exclusion chance in duo cases was 0.99982, whereas the combined mean exclusion chance in trio cases was 0.9999986. The average mutation rate across all loci was 0.0023 (95% confidence intervals: 0.0013-0.0039). These results suggest that the 12 autosomal STR loci can provide highly informative polymorphic data for paternity testing and forensic identification in the Han population in Shanghai, China.

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Section: Allele Frequencies and Forensic Parameters For The 12 Autosomentioning

confidence: 60%

Section: Allele Frequencies and Forensic Parameters For The 12 Autosomentioning

confidence: 99%

Genetic polymorphisms in 12 autosomal STRs in a Shanghai Han population from China

Zhang

Zhang²,

Zhao

et al. 2013

Electrophoresis

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“…Single locus comparisons with available published data for the 5 new ESS loci in other geographically close populations (Table 2) revealed significant differences between the population from Romania and other populations: at one locus with population from Austria (9), eastern part of Croatia (11), Italy (15), and southern part of Poland (17); at two loci with the population from the Czech Republic (12) and Macedonia (16); at three loci with the population from Belgium (10); at four loci with the population from Spain (19), Sweden (20), and United Kingdom (21); at five loci with the population from southern part of Germany (13) and Portugal (18). …”

Section: Resultsmentioning

confidence: 94%

Genetic parameters and allele frequencies of five new European Standard Set STR loci (D10S1248, D22S1045, D2S441, D1S1656, D12S391) in the population of Romania

Stanciu¹,

Vladu²,

Cuţăr³

et al. 2013

Croat Med J

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AimTo establish allele frequencies and genetic parameters for 5 new European Standard Set short tandem repeat (STR) loci in the population of Romania and to compare them with those in other populations.MethodsDNA was isolated using QIAamp 96 DNA Swab BioRobot Kit and Chelex 100 methods. Polymerase chain reaction amplification was done using Investigator ESSplexPlus Kit (D1S1656, D2S441, D2S1338, D3S1358, D8S1179, D10S1248, D12S391, D16S539, D18S51, D19S433, D21S11, D22S1045, FGA, TH01, and vWA). For DNA typing, Applied Biosystems 3500/3500xL Genetic Analyzer was used. Statistical analysis was done using Powerstats, GDA, and Arlequin software.ResultsPower of discrimination and polymorphism information content was highest for two new ESS loci, D1S1656 and D12S391. Comparison of allele frequencies for 5 new ESS loci in Romanian population with previously published population data showed significant differences for all compared populations, with the exception of Hungary. Geographically more distant populations, such as Spain, Sweden, United Kingdom, Germany, and Portugal differed more than closer populations.ConclusionNew ESS STR loci are very useful for the analysis of forensic samples (persons or traces) due to their characteristics (shortness and high polymorphism). In comparisons with other common STR markers, they have a higher power of discrimination and also higher polymorphism information content, and could be used in any national DNA database.

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Forensic Characterization, Genomic Variability and Ancestry Analysis of Six Populations from Odisha Using mtDNA SNPs and Autosomal STRs

Sequeira,

Panda,

Dixit

et al. 2024

Biochem Genet

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Allele frequencies of the new European Standard Set (ESS) loci plus SE33 locus in a population from the Republic of Macedonia

Cited by 7 publications

References 12 publications

Genetic polymorphisms in 12 autosomal STRs in a Shanghai Han population from China

Genetic polymorphisms in 12 autosomal STRs in a Shanghai Han population from China

Genetic parameters and allele frequencies of five new European Standard Set STR loci (D10S1248, D22S1045, D2S441, D1S1656, D12S391) in the population of Romania

Forensic Characterization, Genomic Variability and Ancestry Analysis of Six Populations from Odisha Using mtDNA SNPs and Autosomal STRs

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