In Agriculture, orchards are the deciding factor in the country’s economy. There are many orchards, and citrus and sugarcane will cover 60 percent of them. These citrus orchards satisfy the necessity of citrus fruits and citrus products, and these citrus fruits contain more vitamin C. The citrus orchards have had some problems generating good yields and quality products. Pathogenic diseases, pests, and water shortages are the three main problems that plants face. Farmers can find these problems early on with the support of machine learning and deep learning, which may also change how they feel about technology. By doing this in agriculture, the farmers can cut off the major issues of yield and quality losses. This review gives enormous methods for identifying and classifying plant pathogens, pests, and water stresses using image-based work. In this review, the researchers present detailed information about citrus pathogens, pests, and water deficits. Methods and techniques that are currently available will be used to validate the problem. These will include pre-processing for intensification, segmentation, feature extraction, and selection processes, machine learning-based classifiers, and deep learning models. In this work, researchers thoroughly examine and outline the various research opportunities in the field. This review provides a comprehensive analysis of citrus plants and orchards; Researchers used a systematic review to ensure comprehensive coverage of this topic.