Host cell RNA polymerase II (Pol II)-mediated transcription is inhibited by poliovirus infection. This inhibition is correlated to a specific decrease in the activity of a chromatographic fraction which contains the transcription factor TFIID. To investigate the mechanism by which poliovirus infection results in a decrease of TFIID activity, we have analyzed a component of TFIID, the TATA-binding protein (TBP) Recent studies from our laboratory have shown that poliovirus-induced inhibition of transcription in all three polymerase systems is correlated with the inactivation of specific transcription factors (12,18,29). While we have proposed mechanisms to explain how poliovirus inactivates host cell RNA Pol III-mediated transcription, mechanisms for the inhibition of Pol I-and Pol II-mediated transcription by poliovirus have not yet been elucidated (4,5).A growing number of Pol II transcription factors have been isolated from HeLa cell extracts. To date at least five transcription factors, designated TFIIA, -B, -D, -E, and -F, are required in addition to RNA Pol II for specific transcription of a Pol II gene in a reconstituted system (reviewed in reference 28). Binding of TFIID to the TATA box sequence present in most Pol II promoters is thought to be the first step in the assembly of an active Pol II transcription complex (3, 33). The decrease in Pol II transcription in poliovirusinfected cells is correlated with a specific decrease in the activity of a partially purified fraction which contains TFIID (18). In addition, TFIID and the activity required to specifically restore Pol II transcription in poliovirus-infected cell extracts have been shown to copurify through three columns and to have the same kinetics of heat inactivation (18). However, the mechanism responsible for decreased TFIID activity in poliovirus-infected cells is not known. This question can now be addressed more directly, since the DNAbinding component of human TFIID, the TATA-binding * Corresponding author.protein (TBP), has been cloned and characterized in several laboratories (15,17,26).The inhibition of Pol II-mediated transcription by poliovirus infection has many similarities to the inhibition of Pol III transcription by poliovirus. In the Pol III system, the activity of a partially purified fraction which contains the DNAbinding transcription factor TFIIIC is reduced in poliovirusinfected cells (12). Recently we have shown that a transcriptionally inactive form of TFIIIC found in poliovirus-infected cells can be generated by treating a transcriptionally active form of TFIIIC with cloned, purified poliovirus protease 3C (3CPrO) (5). Unfortunately, since human TFIIIC has not yet been cloned, we do not know whether the cleavage of TFIIIC by 3CPrO is direct. Poliovirus encodes two proteases which have very specific cleavage sites within the poliovirus polyprotein: 3CPro, which cleaves only at glutamine-glycine bonds, and 2AprO, which cleaves only at tyrosine-glycine bonds (21). In addition, 3CD, a precursor to 3CP'°, can also act as a prote...