2013
DOI: 10.1016/j.virol.2012.09.016
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Antigenic characterization of recent H5N1 highly pathogenic avian influenza viruses circulating in Egyptian poultry

Abstract: The extensive circulation of Highly Pathogenic (HP) H5N1 Avian Influenza in Egypt in poultry since 2006 resulted in the emergence of distinct clades with the recent identification of a further clade: 2.2.1.1. The aim of this study was to characterize for the first time the antigenic profile of an extensive collection of genetically diverse Egyptian H5N1 HP viruses isolated between 2007 and 2010 applying antigenic cartography and principal component analysis to serological data. We identified that Egyptian H5N1… Show more

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Cited by 25 publications
(19 citation statements)
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“…Antigenic cartography was generated based on HI data using AntigenMap (32,33) by setting 1:10 as the low reactor. Data normalization was performed as previously reported (34)(35)(36). Influenza A viruses were classified into antigenic clusters using k-mean clustering (37).…”
Section: Methodsmentioning
confidence: 99%
“…Antigenic cartography was generated based on HI data using AntigenMap (32,33) by setting 1:10 as the low reactor. Data normalization was performed as previously reported (34)(35)(36). Influenza A viruses were classified into antigenic clusters using k-mean clustering (37).…”
Section: Methodsmentioning
confidence: 99%
“…The existence of susceptible wild animal and bird species adds further layers of complexity to AIV epidemiology [9]. The emergence of the mutated Egyptian H5N1 mutations was observed early in 2007 [10], despite the implementation of the massive vaccination. Protection from the appearance / reactivation of AIV mutations in endemic areas is partially hampered by one or more of the following factors:…”
Section: Aiv Is Influenza a Virus (Iav) Ofmentioning
confidence: 99%
“…Time to import vaccines from international suppliers IV. Use of "leaking vaccines" [10] and V. Multiple, often antigenic [7].…”
Section: Aiv Is Influenza a Virus (Iav) Ofmentioning
confidence: 99%
“…Viruses that belong to clade 2.2.1 were isolated mostly in Egypt and have been prevalent in poultry in this area since 2006; 346 human cases, including 77 deaths, were reported between 2006 and 2015, and 136 cases, including 39 deaths, were reported in 2015 alone in Egypt (http://www.who.int/ influenza/human_animal_interface/2016_07_19_tableH5N1.pdf?uaϭ1). The Egypt isolates further evolved into two clades, from 2.2.1 to 2.2.1.1 and 2.2.1.2, since 2008 (2)(3)(4). Viruses from Egypt also acquired the ability to bind ␣2,6-linked (human-type) sialic acid receptors, raising concerns about their increased risk of transmission to humans (5).…”
mentioning
confidence: 99%