Antimicrobial preservatives are used as functional excipients
in
multidose formulations of biological therapeutics to destroy or inhibit
the growth of microbial contaminants, which may be introduced by repeatedly
administering doses. Antimicrobial agents can also induce the biophysical
instability of proteins and peptides, which presents a challenge in
optimizing the drug product formulation. Elucidating the structural
basis for aggregation aids in understanding the underlying mechanism
and can offer valuable knowledge and rationale for designing drug
substances and drug products; however, this remains largely unexplored
due to the lack of high-resolution characterization. In this work,
we utilize solution nuclear magnetic resonance (NMR) as an advanced
biophysical tool to study an acylated 31-residue peptide, acyl-peptide
A, and its interaction with commonly used antimicrobial agents, benzyl
alcohol and m-cresol. Our results suggest that acyl-peptide
A forms soluble octamers in the aqueous solution, which tumble slowly
due to an increased molecular weight as measured by diffusion ordered
spectroscopy and 1H relaxation measurement. The addition
of benzyl alcohol does not induce aggregation of acyl-peptide A and
has no chemical shift perturbation in 1H–1H NOESY spectra, suggesting no detectable interaction with the peptide.
In contrast, the addition of 1% (w/v) m-cresol results
in insoluble aggregates composed of 25% (w/w) peptides after a 24-hour
incubation at room temperature as quantified by 1H NMR.
Interestingly, 1H–13C heteronuclear single-quantum
coherence and 1H–1H total correlation
experiment spectroscopy have identified m-cresol
and peptide interactions at specific residues, including Met, Lys,
Glu, and Gln, suggesting that there may be a combination of hydrophobic,
hydrogen bonding, and electrostatic interactions with m-cresol driving this phenomenon. These site-specific interactions
have promoted the formation of higher-order oligomerization such as
dimers and trimers of octamers, eventually resulting in insoluble
aggregates. Our study has elucidated a structural basis of m-cresol-induced self-association that can inform the optimized
design of drug substances and products. Moreover, it has demonstrated
solution NMR as a high-resolution tool to investigate the structure
and dynamics of biological drug products and provide an understanding
of excipient-induced peptide and protein aggregation.