Assessment of Genetic Relationship among 15 Citrus Fruits Using RAPD

Maya, Moslama Aktar; Rabbani, M. G.; Mahboob, Mohammad; Matsubara, Yoichi

doi:10.3923/ajbkr.2012.30.37

Cited by 13 publications

(5 citation statements)

References 10 publications

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“…Additionally, local farming practices and preferences contribute to the richness of pomelo diversity in India along with the other minor or underutilized fruits (Mukherjee et al, 2023;Nandi et al, 2019). This diversity not only enriches the country's citrus industry but also provides opportunities for culinary innovation and sustainable agricultural practices (Maya et al, 2012).…”

Section: Introductionmentioning

confidence: 99%

Morpho-biochemical characterization of pomelo (Citrus grandis L.) accessions and assessment of bioactive compounds under western part of West Bengal

Deb,

Mukherkjee,

Das

2024

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Section: Introductionmentioning

confidence: 99%

Morpho-biochemical characterization of pomelo (Citrus grandis L.) accessions and assessment of bioactive compounds under western part of West Bengal

Deb,

Mukherkjee,

Das

2024

ijmfmap

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“…Many techniques have been successfully used in citrus phylogenetic relationship analysis, such as AFLP (Amplified fragment length polymorphism) (Pang et al 2007), EST-SSR (expressed sequence tag-simple sequence repeat) and cpSSR (chloroplast SSR) (Wang and Jiang 2010), PCR-RFLP (Polymerase chain reaction-restriction fragment length polymorphism) (Golein et al 2012), RAPD (Randomly amplified polymorphic DNA) (Maya et al 2012). In trifoliate orange, Fang et al (1997) constructed a fingerprint map from 48 vegetatively propagated Poncirus accessions using isozymes, RFLPs and inter-simple sequence repeat markers.…”

Section: Introductionmentioning

confidence: 99%

Genetic diversity of Poncirus and phylogenetic relationships with its relatives revealed by SSR and SNP/InDel markers

et al. 2015

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The polymorphic markers of nuclear SSR (simple sequence repeat), SNP (single nucleotide polymorphism)/InDel (insertion-deletion length polymorphism), and cpSSR (chloroplast SSR) were used to evaluate the genetic diversity of 52 trifoliate oranges and their relatives. The two genomic DNA-based markers produced high values of PIC (polymorphic information content) at 0.45 for SNP/InDel and 0.32 for nuclear SSR, indicating that there is a large diversity of genetic variation within the trifoliate oranges. Three UPGMA (unweighted pair-group method with arithmetic means) dendrograms were generated based on the results of three marker systems. At 0.76 of coefficient, all of Poncirus accessions were clustered into one group, except the 74-1 Early Poncirus, one of the three precocious trifoliate oranges, which was placed separately into another group by nuclear SSR. At a higher coefficient, the trifoliate oranges were discriminated into 4, 6 and 6 groups by nuclear SSR (0.86), SNP/InDel (0.95), and cpSSR (0.95), respectively. The results revealed that three precocious trifoliate oranges were originated from different sources. Hubei Early Poncirus and Beibei Early Poncirus were the asexual mutants of different trifoliate oranges, and 74-1 was probably a sexual hybrid. The present study also indicated that 'Zhiwenzhou,' a diploid chimera of trifoliate orange and Satsuma is more closely related to Satsuma rather than to trifoliate orange, which is in concordance with the results of morphological observation.

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“…Citrus fruit production is widely popular agricultural activity in the world in respect of nutritional and economic aspect (Maya et al, 2012;Sharma et al, 2015). Among the tropical and subtropical fruits, citrus fruit occupies an eminent position next to mango and guava.…”

Section: Introductionmentioning

confidence: 99%

“…To apprehension of genetic variation in citrus outlining and implementation of breeding, research is essential (Uzun et al, 2009). Moreover, germplasm collection, conservation and molecular studies should be carried out for future research (Maya et al, 2012). By following update characterization method genetic variability should be studied more precisely from the collected genetic materials (Rao and Hodgkin, 2002).…”

Section: Introductionmentioning

confidence: 99%

Assessing the genetic diversity of twenty one Colombo limon L. genotypes through multivariate and covariance matrix analysis

Hoque

Chowdhury

Maya

et al. 2021

Acta fytotechn zootechn

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Licensed under a Creative Commons Attribution 4.0 International License Genetic diversity of selected 21 colombo lemon (Colombo limon L.) genotypes were evaluated through multivariate analysis and also through covariance matrix to identify the promising parents for an auspicious crossing program for development of location specific high yielding genotypes. To view the endurance of significant heterogeneity, the genetic constitution of selected 21 genotypes were classified into four clusters (I, II, III & IV). Among them, the assemblage cluster II dominated the maximum number of genetic constitution, whereas assemblage cluster I possessed minimum number of genetic constitution. Surrounded by the genetic constitution, the first principal axis largely affords 47.1% of the variation. Inter genotypic gap was observed the highest (13.82) between the genetic constitution in both 'CL002' and 'CL017' genotypes, followed by genotypes 'CL002' and 'CL019' . The maximum intracluster distance was noticed (23.33) for cluster IV, whereas cluster III showed the lowest intracluster distance (10.62). In between assemblage clusters I and IV showed the highest interassemblage distance (165.64), while the lowest distance (44.84) was estimated between II and III assemblages. Considering the cluster mean bulky fruit remarked in cluster IV (256.00 g). Besides these the highest fruit yield plant -1 was also recorded in cluster IV (20.50 kg). In respect of both quantitative parameters, assemblage IV was quite diverse compare with all other assemblages. Contemplating the immensity of genetic distance and quantitative performance the genotypes 'CL002' , 'CL005' , 'CL006' and 'CL011' from cluster IV obviously pertinent for productive crossing program to promote high yielding colombo lemon genotypes.

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Assessment of Genetic Relationship among 15 Citrus Fruits Using RAPD

Cited by 13 publications

References 10 publications

Morpho-biochemical characterization of pomelo (Citrus grandis L.) accessions and assessment of bioactive compounds under western part of West Bengal

Morpho-biochemical characterization of pomelo (Citrus grandis L.) accessions and assessment of bioactive compounds under western part of West Bengal

Genetic diversity of Poncirus and phylogenetic relationships with its relatives revealed by SSR and SNP/InDel markers

Assessing the genetic diversity of twenty one Colombo limon L. genotypes through multivariate and covariance matrix analysis

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