The atypical PKC isoforms (ζ and ι) play essential roles in regulating various cellular processes. Both the hetero-interaction between PKCζ and p62 through their N-terminal PB1 domains and the homo-oligomerization of p62 via its PB1 domain are critical for the activation of NF-B signaling; however, the molecular mechanisms concerning the formation and regulation of these homotypic complexes remain unclear. Here we determined the crystal structure of PKCζ-PB1 in complex with a monomeric p62-PB1 mutant, where the massive electrostatic interactions between the acidic OPCA motif of PKCζ-PB1 and the basic surface of p62-PB1, as well as additional hydrogen bonds, ensure the formation of a stable and specific complex. The PKCζ-p62 interaction is interfered with the modification of a specific Cys of PKCζ by the antiarthritis drug aurothiomalate, though all four cysteine residues in the PKCζ-PB1 domain can be modified in in vitro assay. In addition, detailed structural and biochemical analyses demonstrate that the PB1 domains of aPKCs belong to the type I group, which can depolymerize the high-molecular-weight p62 aggregates into homo-oligomers of lower order. These data together unravel the molecular mechanisms of the homo-or hetero-interactions between p62 and PKCζ and provide the basis for designing inhibitors of NF-B signaling. The protein kinase C (PKC) family comprises a number of highly related serine/threonine kinases in mammals, which exert pivotal roles in many cellular processes and have been the focus of drug development in cancer, diabetic complications, heart failure and many other diseases [1][2][3]. Based on their cofactor requirements and sequence homology, these important kinases can be classified in three subfamilies: conventional (cPKC: α, β and γ), novel (nPKC: δ, ε, η and θ), and atypical (aPKC: ζ and ι/λ) [4]. The cPKCs are activated by both diacylglycerol (DAG) and Ca 2+ , and each cPKC consists of an N-terminal autoinhibitory pseudosubstrate motif, a DAG binding C1 domain and a Ca 2+ sensing C2 domain followed by the catalytic kinase domain. The nPKCs resemble the cPKCs but are only activated by DAG because their C2 domains do not bind Ca 2+ . The aPKC subfamily is unresponsive to both DAG and Ca 2+ due to the presence of an incomplete C1 domain and the lack of a C2 domain. Instead, the aPKCs are regulated by the PB1 (Phox and Bem1p) domain at their N-termini ( Figure 1A), which is one of the protein-interacting modules that undergo homotypic domain-domain interactions and thus mediate a number of cellular signaling pathways [5][6][7][8].
PKCζThe aPKC isoforms have been implicated in the regulation of many important signaling pathways such as NF-B signaling, cell polarity pathway and MAPK/ERK cascade, where the PB1-mediated interactions between aPKCs and