Hepatic ischemia‐reperfusion (I/R) injury is a major challenge in liver resection and transplantation surgeries. Previous studies have revealed that guanine nucleotide–binding protein G(i)α2 (GNAI2) was involved in the progression of myocardial and cerebral I/R injury, but the role and function of GNAI2 in hepatic I/R have not been elucidated. The hepatocyte‐specific GNAI2 knockout (GNAI2hep−/−) mice were generated and subjected to hepatic I/R injury. Primary hepatocytes isolated from GNAI2hep−/− and GNAI2flox/flox mice were cultured and challenged to hypoxia‐reoxygenation insult. The specific function of GNAI2 in I/R‐triggered hepatic injury and the underlying molecular mechanism were explored by various phenotypic analyses and molecular biology methods. In this study, we demonstrated that hepatic GNAI2 expression was significantly increased in liver transplantation patients and wild‐type mice after hepatic I/R. Interestingly, hepatocyte‐specific GNAI2 deficiency attenuated I/R‐induced liver damage, inflammation cytokine expression, macrophage/neutrophil infiltration, and hepatocyte apoptosis in vivo and in vitro. Mechanistically, up‐regulation of GNAI2 phosphorylates mixed‐lineage protein kinase 3 (MLK3) through direct binding, which exacerbated hepatic I/R damage via MAPK and NF‐κB pathway activation. Furthermore, blocking MLK3 signaling reversed GNAI2‐mediated hepatic I/R injury. Our study firstly identifies GNAI2 as a promising target for prevention of hepatic I/R‐induced injury and related liver diseases.—Sun, Q., He, Q., Xu, J., Liu, Q., Lu, Y., Zhang, Z., Xu, X., Sun, B. Guanine nucleotide–binding protein G(i)α2 aggravates hepatic ischemia‐reperfusion injury in mice by regulating MLK3 signaling. FASEB J. 33, 7049–7060 (2019). http://www.fasebj.org