A new siphophage (LH1) was isolated from raw milk using a Staphylococcus aureus ST352 host. Its genome (46,048 bp, 57 open reading frames) includes the two genes encoding Panton-Valentine leukocidin (PVL), a virulence factor usually harbored by S. aureus prophages. Nine structural proteins were identified, including a tail protein generated through a ؉1 frameshift. A phage lytic mutant was isolated, and its analysis revealed the deletion of genes coding for the PVL and an integrase. The deletion likely occurred through recombination between direct repeats.
Staphylococcus aureus is a bacterial pathogen that can infect humans, animals, and plants and may contaminate foods. Some strains harbor several pathogenic and virulent components, including exotoxins, such as enterotoxins (SE), exfoliatins, toxic shock syndrome toxin (TSST), hemolysins, and Panton-Valentine leukocidin (PVL) (1, 2). The genes coding for this toxin are located on prophages (3). The PVL toxin belongs to the synergohymenotropic toxin family and is composed of two subunits, named LukF-PV and LukS-PV (4-6). These secretory proteins act together by forming pores in cell membranes and lysing neutrophils and macrophages, thus leading to pneumonia and eventual cell death (7,8).Since the discovery of the PVL toxin by Panton and Valentine in 1932 (5), at least eight PVL-encoding phages belonging to the Siphoviridae family have been characterized (3, 9-11). They can be classified into three different groups according to the replication/ transcription region and morphogenesis module as well as their host range (9,11,12). Members of groups 1 and 3 have isometric capsids, and members of group 2 have elongated capsids. The presence of the same toxin genes in morphologically distinct phages suggests that they can be readily exchanged, possibly during coinfection.Unlike temperate phages, virulent phages can be used as biocontrol agents against pathogenic strains in medical and food applications. The presence of an integrase gene and toxin genes in phage genomes leads to poor antibacterial efficacy and safety concerns, respectively. Consequently, only virulent phages (or temperate phages replicating on indicator strains) lacking any virulence factor have been used as biocontrol agents against S. aureus in foods (13-16) and in animal models (17)(18)(19). In an effort to isolate new virulent phages to control Staphylococcus contaminations in dairy products, we analyzed raw milk samples for the presence of staphylococcal phages.One raw milk sample was obtained from each of six dairy farms. One hundred microliters of an overnight culture of S. aureus 01 (ST352) grown in tryptic soy broth (TSB) at 37°C was added to 5 ml of 2ϫ TSB and 5 ml of the milk sample. The culture was incubated overnight at 37°C. Five milliliters of the first amplification was added to 5 ml of 2ϫ TSB, as well as 100 l of the overnight bacterial culture, and incubated overnight at 37°C. The latter step was repeated once. Then the presence of phages was tested by depositing 5 l of the last amplif...