© F e r r a t a S t o r t i F o u n d a t i o nseparate provisional entity in the 2008 World Health Organization (WHO) classification of myeloid neoplasms, under the heading of "AML with recurrent genetic abnormalities". 7 In the 2001 WHO classification, this category included only AML with t(15;17), t(8;21), inv(16), and MLL rearrangements and in 2008 it was expanded to include AMLs carrying t(6;9), inv(3) or t(3;3), AML (megakaryoblastic) with t(1;22) and two provisional entities, i.e. AML with mutated NPM1 and AML with mutated CEBPA. Thus, in the 2008 WHO classification, the category of "AML with recurrent genetic abnormalities" covers about 60% of AML.The identification of the specific genetic alteration underlying each of the AML subtypes listed in the category of "AML with recurrent genetic abnormalities" is of critical importance since it helps to assign patients to different prognostic groups, thus influencing therapy. For example, in AML patients under 60 years of age, NPM1 mutations consistently predict favorable prognosis, 6 when no concomitant FLT3-ITD mutation is present, whilst in AML patients 70 years old or over NPM1 mutations appear to be the only factor influencing prognosis in multivariate analysis. 8 The search for genetic alterations using molecular methods would ideally be the gold standard for diagnosis. Unfortunately, not all centers, especially in developing countries, are equipped for molecular studies and this may hamper the worldwide use of the WHO classification. These problems could potentially be solved by developing simple surrogates for molecular studies. Here, we briefly review the molecular methods and their alternatives that are currently available for diagnosing AML with mutated NPM1.
Detection of NPM1 mutations by molecular techniquesThe normal NPM1 gene configuration and the first six NPM1 mutations we identified in AML, 2 which lead to common structural changes of the NPM1 protein C-terminus, are shown in Figure 1. Over the past five years, several qualitative and quantitative molecular assays for identifying NPM1 mutations have been developed and tested in a large number of AML patients.(i) Qualitative assays for NPM1 mutations: these highly sensitive and specific assays for detecting NPM1 mutations 9-15 are best applied to RNA or DNA extracted from fresh bone marrow or peripheral blood leukemic cells 13 but plasma 16 and paraffin-embedded samples 17 are also suitable. More than 50 molecular variants of NPM1 mutations have been identified to date, 18 mostly involving exon-12, and occasionally other exons.19 NPM1 mutations occur in about 30% of adult AML 4 (50-60% of AML with normal karyotype). NPM1 mutation A (a duplication of TCTG at position 956 to 959 of the reference sequence) accounts for 75-80% of cases.2 Mutation B and D account for about 10% and 5% of cases, respectively; other mutations are very rare. NPM1 mutations are less frequent in childhood (about 8% of pediatric AML) 20,21 and have been never found in children under three years of age.
21Pediatric an...